Plasmid NZ_CP085904.1

Sequence

Nucleotide Information

Accession	NZ_CP085904.1
Description	Enterococcus faecium strain SC1762 plasmid p10, complete sequence
Source	refseq
Topology	circular
Length	2056 bp
GC Content	0.38 %
Created at NCBI	Nov. 5, 2021

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Enterococcus faecium (1352)

Lineage

Superkingdom	Bacteria (2)
Phylum	Bacillota (1239)
Class	Bacilli (91061)
Order	Lactobacillales (186826)
Family	Enterococcaceae (81852)
Genus	Enterococcus (1350)
Species	Enterococcus_faecium (1352)
Strain

Assembly

Genome Data Information

Accession	GCF_020736585.1
Assembly Coverage	200

Biosample

Curated Collection Information

Accession	22627481

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	China,wenzhou
Original Query Type	name
Coordinates (Lat/Lon)	28.00/120.69
Address	China,wenzhou

ECOSYSTEM

Original Query	Homo sapiens,cell culture
Classification	cell_culture,host_associated
Host-associated Taxon	Homo sapiens (9606)

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_LR135427.1	See Comparison
AP031253.1	See Comparison
NZ_CP093956.1	See Comparison
NZ_CP059803.1	See Comparison
NZ_CP062275.1	See Comparison
NZ_CP093952.1	See Comparison
NZ_LR135427.1	See Comparison
NZ_CP083477.1	See Comparison
NZ_CP072717.1	See Comparison
NZ_CP085916.1	See Comparison
NZ_CP075610.1	See Comparison
NZ_CP040744.1	See Comparison
NZ_CP040707.1	See Comparison
NZ_LR135234.1	See Comparison
NZ_CP085916.1	See Comparison
AP031253.1	See Comparison
NZ_CP059803.1	See Comparison
NZ_CP093956.1	See Comparison
NZ_CP093952.1	See Comparison
NZ_CP062275.1	See Comparison
NZ_CP083477.1	See Comparison
NZ_CP072717.1	See Comparison
NZ_CP075610.1	See Comparison
NZ_LR135234.1	See Comparison
NZ_CP040744.1	See Comparison
NZ_CP040707.1	See Comparison
NZ_CP062275.1	See Comparison
NZ_LR135427.1	See Comparison
AP031253.1	See Comparison
NZ_CP059803.1	See Comparison
NZ_CP093956.1	See Comparison
NZ_CP093952.1	See Comparison
NZ_CP083477.1	See Comparison
NZ_CP085916.1	See Comparison
NZ_LR135234.1	See Comparison
NZ_CP075610.1	See Comparison
NZ_CP040744.1	See Comparison
NZ_CP040707.1	See Comparison
NZ_CP072717.1	See Comparison
NZ_CP062275.1	See Comparison
AP031253.1	See Comparison
NZ_LR135427.1	See Comparison
NZ_CP059803.1	See Comparison
NZ_CP093956.1	See Comparison
NZ_CP093952.1	See Comparison
NZ_CP075610.1	See Comparison
NZ_CP085916.1	See Comparison
NZ_CP083477.1	See Comparison
NZ_CP040744.1	See Comparison
NZ_CP072717.1	See Comparison
NZ_CP040707.1	See Comparison
NZ_CP062275.1	See Comparison
NZ_LR135234.1	See Comparison
NZ_LR135427.1	See Comparison
AP031253.1	See Comparison
NZ_CP072717.1	See Comparison
NZ_CP093956.1	See Comparison
NZ_CP093952.1	See Comparison
NZ_CP085916.1	See Comparison
NZ_CP075610.1	See Comparison
NZ_CP059803.1	See Comparison
NZ_CP083477.1	See Comparison
AP031253.1	See Comparison
NZ_CP040744.1	See Comparison
NZ_CP040707.1	See Comparison
NZ_LR135234.1	See Comparison
NZ_LR135427.1	See Comparison
NZ_CP075610.1	See Comparison
NZ_CP062275.1	See Comparison
NZ_CP059803.1	See Comparison
NZ_CP085904.1	See Comparison
NZ_CP085916.1	See Comparison
NZ_CP093956.1	See Comparison
NZ_CP093952.1	See Comparison
NZ_CP083477.1	See Comparison
NZ_CP072717.1	See Comparison
NZ_CP040744.1	See Comparison
NZ_CP040707.1	See Comparison
NZ_LR135234.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore