Plasmid NZ_CP083782.1

Sequence

Nucleotide Information

Accession	NZ_CP083782.1
Description	Klebsiella pneumoniae strain INF118 isolate INF118 plasmid pINF118_7, complete sequence
Source	refseq
Topology	circular
Length	3549 bp
GC Content	0.47 %
Created at NCBI	Sept. 29, 2021

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Klebsiella pneumoniae (573)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Klebsiella (570)
Species	Klebsiella_pneumoniae (573)
Strain

Assembly

Genome Data Information

Accession	GCF_020149875.1
Assembly Coverage	147

Biosample

Curated Collection Information

Accession	4042597

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	Australia
Original Query Type	name
Coordinates (Lat/Lon)	-24.78/134.76
Address	Australia

ECOSYSTEM

Original Query	Homo sapiens,wound swab
Classification	host_associated,wound
Host-associated Taxon	Homo sapiens (9606)

DISEASE

Original Query	diseased
DOID/SYMP	Disease (DOID:4 ) A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_CP031821.1	See Comparison
NZ_LR890366.1	See Comparison
LR890732.1	See Comparison
LR890623.1	See Comparison
LR890593.1	See Comparison
LR890445.1	See Comparison
NZ_CP115686.1	See Comparison
NZ_LC505603.1	See Comparison
NZ_LR890366.1	See Comparison
CP094901.1	See Comparison
NZ_CP084816.1	See Comparison
NZ_CP031821.1	See Comparison
NZ_CP030730.1	See Comparison
NZ_CP030738.1	See Comparison
NZ_CP030746.1	See Comparison
NZ_CP030723.1	See Comparison
NZ_LC505603.1	See Comparison
LR890732.1	See Comparison
LR890623.1	See Comparison
LR890593.1	See Comparison
LR890445.1	See Comparison
CP094901.1	See Comparison
NZ_CP115686.1	See Comparison
NZ_CP030730.1	See Comparison
NZ_CP030738.1	See Comparison
NZ_CP030746.1	See Comparison
NZ_CP030723.1	See Comparison
NZ_LR890366.1	See Comparison
NZ_CP084816.1	See Comparison
NZ_CP031821.1	See Comparison
NZ_LR890366.1	See Comparison
LR890445.1	See Comparison
NZ_CP030730.1	See Comparison
NZ_CP030738.1	See Comparison
NZ_CP030746.1	See Comparison
NZ_CP030723.1	See Comparison
CP094901.1	See Comparison
NZ_CP084816.1	See Comparison
LR890732.1	See Comparison
LR890623.1	See Comparison
LR890593.1	See Comparison
NZ_LC505603.1	See Comparison
NZ_CP115686.1	See Comparison
NZ_CP083782.1	See Comparison
NZ_CP031821.1	See Comparison
NZ_LC505603.1	See Comparison
LR890732.1	See Comparison
LR890623.1	See Comparison
LR890593.1	See Comparison
LR890445.1	See Comparison
CP094901.1	See Comparison
NZ_CP030730.1	See Comparison
NZ_CP030738.1	See Comparison
NZ_CP030746.1	See Comparison
NZ_CP030723.1	See Comparison
NZ_CP115686.1	See Comparison
NZ_CP031821.1	See Comparison
NZ_CP084816.1	See Comparison
NZ_LR890366.1	See Comparison
NZ_CP115686.1	See Comparison
NZ_LC505603.1	See Comparison
LR890732.1	See Comparison
LR890623.1	See Comparison
LR890593.1	See Comparison
LR890445.1	See Comparison
NZ_LC505603.1	See Comparison
NZ_CP030730.1	See Comparison
NZ_CP030738.1	See Comparison
NZ_CP030746.1	See Comparison
NZ_CP030723.1	See Comparison
NZ_CP031821.1	See Comparison
NZ_LR890366.1	See Comparison
LR890732.1	See Comparison
LR890623.1	See Comparison
LR890593.1	See Comparison
LR890445.1	See Comparison
CP094901.1	See Comparison
NZ_CP084816.1	See Comparison
NZ_CP115686.1	See Comparison
CP094901.1	See Comparison
NZ_CP030730.1	See Comparison
NZ_CP030738.1	See Comparison
NZ_CP030746.1	See Comparison
NZ_CP030723.1	See Comparison
NZ_CP084816.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore