Plasmid NZ_CP083009.1

Sequence

Nucleotide Information

Accession NZ_CP083009.1
Description Klebsiella pneumoniae strain 6711.43 plasmid p2-6711.43, complete sequence
Source refseq
Topology circular
Length 43380 bp
GC Content 0.47 %
Created at NCBI Dec. 11, 2021



Assembly

Genome Data Information

Accession GCF_021137735.1
Assembly Coverage 218.768


Biosample

Curated Collection Information
Accession 21016528

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 46.947928N;7.422277E
Original Query Type coordinates
Coordinates (Lat/Lon) 46.95/7.42
Address Inselspital, 18, Freiburgstrasse, Holligen, Stadtteil III, Bern, Bern-Mittelland administrative district, Bernese Mittelland administrative region, Bern, 3010, Switzerland

ECOSYSTEM
Original Query Homo sapiens,rectal swab
Classification gastrointestinal_system,host_associated,rectal
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None/screening
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP011983.1 See Comparison
CP011992.1 See Comparison
NZ_CP010395.1 See Comparison
JNBM01000003.1 See Comparison
NC_019157.1 See Comparison
NZ_CP043050.1 See Comparison
NZ_LR130550.1 See Comparison
NZ_CP027057.1 See Comparison
NZ_CP027051.1 See Comparison
CP028182.1 See Comparison
NZ_CP022575.1 See Comparison
NZ_CP136409.1 See Comparison
NZ_CP135456.1 See Comparison
CP128733.1 See Comparison
CP128768.1 See Comparison
CP128673.1 See Comparison
NZ_CP149489.1 See Comparison
NZ_CP142912.1 See Comparison
NZ_KX618697.1 See Comparison
NZ_CP022694.2 See Comparison
NZ_CP110955.1 See Comparison
NZ_CP068606.1 See Comparison
NZ_CP068612.1 See Comparison
NZ_MT560074.1 See Comparison
NZ_MT560076.1 See Comparison
NZ_CP058328.1 See Comparison
NZ_CP070561.1 See Comparison
NZ_CP070086.1 See Comparison
NZ_OP378666.1 See Comparison
NZ_CP115703.1 See Comparison
NZ_CP074526.1 See Comparison
NZ_CP074443.1 See Comparison
NZ_CP110945.1 See Comparison
NZ_CP110950.1 See Comparison
NZ_CP110965.1 See Comparison
NZ_CP110960.1 See Comparison
NZ_CP110939.1 See Comparison
NZ_CP098359.1 See Comparison
OW969868.1 See Comparison
CP067942.1 See Comparison
OW967425.1 See Comparison
OW967613.1 See Comparison
OW967604.1 See Comparison
OW967583.1 See Comparison
OW967370.1 See Comparison
OW967253.1 See Comparison
OW967234.1 See Comparison
OW967193.1 See Comparison
OW967170.1 See Comparison
NZ_CP092757.1 See Comparison
NZ_CP092769.1 See Comparison
CP067919.1 See Comparison
CP067894.1 See Comparison
CP067875.1 See Comparison
CP067731.1 See Comparison
CP067727.1 See Comparison
CP067869.1 See Comparison
CP067570.1 See Comparison
CP067834.1 See Comparison
CP067547.1 See Comparison
CP067540.1 See Comparison
CP067701.1 See Comparison
CP067820.1 See Comparison
CP067682.1 See Comparison
CP067528.1 See Comparison
CP067784.1 See Comparison
CP067523.1 See Comparison
CP067765.1 See Comparison
CP067498.1 See Comparison
CP067493.1 See Comparison
CP067646.1 See Comparison
CP067641.1 See Comparison
CP067772.1 See Comparison
CP067487.1 See Comparison
CP067756.1 See Comparison
CP067471.1 See Comparison
CP067635.1 See Comparison
CP067740.1 See Comparison
CP067625.1 See Comparison
CP067462.1 See Comparison
NZ_CP021836.1 See Comparison
CP067446.1 See Comparison
NZ_CP083009.1 See Comparison
CP067619.1 See Comparison
CP067602.1 See Comparison
CP067597.1 See Comparison
CP080691.1 See Comparison
CP080655.1 See Comparison
CP021901.1 See Comparison
NZ_CP020839.1 See Comparison
NZ_CP021542.1 See Comparison
NZ_CP020111.1 See Comparison
NZ_CP020074.1 See Comparison
NZ_CP021715.1 See Comparison
NZ_CP015825.1 See Comparison
NZ_CP018951.1 See Comparison
NZ_CP018429.1 See Comparison
NZ_CP018435.1 See Comparison
NZ_CP018423.1 See Comparison
CP011992.1 See Comparison
NZ_CP011983.1 See Comparison
NZ_LR130550.1 See Comparison
NC_019157.1 See Comparison
NZ_CP043050.1 See Comparison
NZ_CP010395.1 See Comparison
JNBM01000003.1 See Comparison
NZ_CP027057.1 See Comparison
CP028182.1 See Comparison
NZ_CP027051.1 See Comparison
NZ_CP135456.1 See Comparison
NZ_CP136409.1 See Comparison
NZ_CP022575.1 See Comparison
CP128733.1 See Comparison
CP128768.1 See Comparison
CP128673.1 See Comparison
NZ_CP149489.1 See Comparison
NZ_CP142912.1 See Comparison
NZ_KX618697.1 See Comparison
NZ_CP022694.2 See Comparison
NZ_CP070086.1 See Comparison
NZ_CP070561.1 See Comparison
NZ_CP068606.1 See Comparison
NZ_CP068612.1 See Comparison
NZ_MT560074.1 See Comparison
NZ_MT560076.1 See Comparison
NZ_CP058328.1 See Comparison
NZ_CP098359.1 See Comparison
NZ_OP378666.1 See Comparison
NZ_CP115703.1 See Comparison
NZ_CP074526.1 See Comparison
NZ_CP074443.1 See Comparison
NZ_CP110955.1 See Comparison
NZ_CP110945.1 See Comparison
NZ_CP110950.1 See Comparison
NZ_CP110965.1 See Comparison
NZ_CP110960.1 See Comparison
NZ_CP110939.1 See Comparison
OW969868.1 See Comparison
OW967425.1 See Comparison
OW967613.1 See Comparison
OW967604.1 See Comparison
OW967370.1 See Comparison
OW967583.1 See Comparison
OW967253.1 See Comparison
OW967234.1 See Comparison
OW967193.1 See Comparison
OW967170.1 See Comparison
NZ_CP092757.1 See Comparison
NZ_CP092769.1 See Comparison
CP067942.1 See Comparison
CP067919.1 See Comparison
CP067894.1 See Comparison
CP067875.1 See Comparison
CP067869.1 See Comparison
CP067834.1 See Comparison
CP067820.1 See Comparison
CP067701.1 See Comparison
CP067784.1 See Comparison
CP067765.1 See Comparison
CP067682.1 See Comparison
CP067772.1 See Comparison
CP067646.1 See Comparison
CP067756.1 See Comparison
CP067740.1 See Comparison
CP067731.1 See Comparison
CP067727.1 See Comparison
CP067528.1 See Comparison
CP067641.1 See Comparison
CP067523.1 See Comparison
CP067635.1 See Comparison
CP067625.1 See Comparison
CP067498.1 See Comparison
CP067493.1 See Comparison
CP067619.1 See Comparison
CP067487.1 See Comparison
CP067602.1 See Comparison
CP067471.1 See Comparison
CP067597.1 See Comparison
CP067462.1 See Comparison
CP067570.1 See Comparison
CP067446.1 See Comparison
CP067547.1 See Comparison
CP067540.1 See Comparison
CP080691.1 See Comparison
CP080655.1 See Comparison
NZ_CP020111.1 See Comparison
NZ_CP021836.1 See Comparison
CP021901.1 See Comparison
NZ_CP021542.1 See Comparison
NZ_CP021715.1 See Comparison
NZ_CP020839.1 See Comparison
NZ_CP020074.1 See Comparison
NZ_CP018951.1 See Comparison
NZ_CP015825.1 See Comparison
NZ_CP018429.1 See Comparison
NZ_CP018435.1 See Comparison
NZ_CP018423.1 See Comparison
NZ_CP027051.1 See Comparison
NZ_CP011983.1 See Comparison
CP011992.1 See Comparison
NZ_CP010395.1 See Comparison
JNBM01000003.1 See Comparison
NZ_CP043050.1 See Comparison
NC_019157.1 See Comparison
NZ_LR130550.1 See Comparison
NZ_CP027057.1 See Comparison
CP028182.1 See Comparison
NZ_CP136409.1 See Comparison
NZ_CP022575.1 See Comparison
CP128733.1 See Comparison
NZ_CP135456.1 See Comparison
CP128768.1 See Comparison
CP128673.1 See Comparison
NZ_CP142912.1 See Comparison
NZ_CP149489.1 See Comparison
NZ_KX618697.1 See Comparison
NZ_CP022694.2 See Comparison
NZ_CP070086.1 See Comparison
NZ_OP378666.1 See Comparison
NZ_CP070561.1 See Comparison
NZ_CP068606.1 See Comparison
NZ_CP068612.1 See Comparison
NZ_MT560074.1 See Comparison
NZ_MT560076.1 See Comparison
NZ_CP058328.1 See Comparison
NZ_CP110955.1 See Comparison
NZ_CP115703.1 See Comparison
NZ_CP074526.1 See Comparison
NZ_CP074443.1 See Comparison
NZ_CP110945.1 See Comparison
NZ_CP110950.1 See Comparison
NZ_CP110965.1 See Comparison
NZ_CP110960.1 See Comparison
NZ_CP110939.1 See Comparison
NZ_CP098359.1 See Comparison
NZ_CP092757.1 See Comparison
OW969868.1 See Comparison
OW967425.1 See Comparison
OW967613.1 See Comparison
OW967604.1 See Comparison
OW967583.1 See Comparison
OW967370.1 See Comparison
OW967253.1 See Comparison
OW967234.1 See Comparison
OW967193.1 See Comparison
OW967170.1 See Comparison
NZ_CP092769.1 See Comparison
CP067942.1 See Comparison
CP067894.1 See Comparison
CP067875.1 See Comparison
CP067869.1 See Comparison
CP067834.1 See Comparison
CP067919.1 See Comparison
CP067820.1 See Comparison
CP067701.1 See Comparison
CP067784.1 See Comparison
CP067682.1 See Comparison
CP067646.1 See Comparison
CP067765.1 See Comparison
CP067772.1 See Comparison
CP067756.1 See Comparison
CP067740.1 See Comparison
CP067641.1 See Comparison
CP067731.1 See Comparison
CP067635.1 See Comparison
CP067727.1 See Comparison
CP067625.1 See Comparison
CP067619.1 See Comparison
CP067602.1 See Comparison
CP067523.1 See Comparison
CP067597.1 See Comparison
CP067570.1 See Comparison
CP067498.1 See Comparison
CP067493.1 See Comparison
CP067487.1 See Comparison
CP067547.1 See Comparison
CP067471.1 See Comparison
CP067540.1 See Comparison
CP067462.1 See Comparison
CP067528.1 See Comparison
CP067446.1 See Comparison
NZ_CP021836.1 See Comparison
CP080691.1 See Comparison
CP080655.1 See Comparison
NZ_CP020074.1 See Comparison
NZ_CP018951.1 See Comparison
CP021901.1 See Comparison
NZ_CP015825.1 See Comparison
NZ_CP021542.1 See Comparison
NZ_CP021715.1 See Comparison
NZ_CP020839.1 See Comparison
NZ_CP020111.1 See Comparison
NC_019157.1 See Comparison
NZ_CP018429.1 See Comparison
NZ_CP018435.1 See Comparison
NZ_CP018423.1 See Comparison
NZ_CP011983.1 See Comparison
CP011992.1 See Comparison
NZ_CP010395.1 See Comparison
JNBM01000003.1 See Comparison
CP128733.1 See Comparison
NZ_CP043050.1 See Comparison
NZ_LR130550.1 See Comparison
NZ_CP027057.1 See Comparison
NZ_CP027051.1 See Comparison
CP028182.1 See Comparison
NZ_CP022575.1 See Comparison
NZ_CP136409.1 See Comparison
NZ_CP135456.1 See Comparison
CP128768.1 See Comparison
CP128673.1 See Comparison
NZ_CP149489.1 See Comparison
NZ_CP142912.1 See Comparison
NZ_CP022694.2 See Comparison
NZ_KX618697.1 See Comparison
NZ_MT560074.1 See Comparison
NZ_CP070561.1 See Comparison
NZ_CP070086.1 See Comparison
NZ_CP068606.1 See Comparison
NZ_CP068612.1 See Comparison
NZ_MT560076.1 See Comparison
NZ_CP058328.1 See Comparison
NZ_OP378666.1 See Comparison
NZ_CP074526.1 See Comparison
NZ_CP074443.1 See Comparison
NZ_CP115703.1 See Comparison
CP067875.1 See Comparison
OW967613.1 See Comparison
OW967604.1 See Comparison
OW967583.1 See Comparison
NZ_CP092757.1 See Comparison
NZ_CP110955.1 See Comparison
NZ_CP110945.1 See Comparison
NZ_CP110950.1 See Comparison
NZ_CP110965.1 See Comparison
NZ_CP110960.1 See Comparison
NZ_CP110939.1 See Comparison
NZ_CP098359.1 See Comparison
OW969868.1 See Comparison
OW967425.1 See Comparison
OW967370.1 See Comparison
OW967253.1 See Comparison
OW967234.1 See Comparison
OW967193.1 See Comparison
OW967170.1 See Comparison
CP067869.1 See Comparison
NZ_CP092769.1 See Comparison
CP067834.1 See Comparison
CP067820.1 See Comparison
CP067784.1 See Comparison
CP067765.1 See Comparison
CP067772.1 See Comparison
CP067756.1 See Comparison
CP067740.1 See Comparison
CP067731.1 See Comparison
CP067727.1 See Comparison
CP067701.1 See Comparison
CP067682.1 See Comparison
CP067646.1 See Comparison
CP067641.1 See Comparison
CP067635.1 See Comparison
CP067625.1 See Comparison
CP067619.1 See Comparison
CP067602.1 See Comparison
CP067597.1 See Comparison
CP067570.1 See Comparison
CP067547.1 See Comparison
CP067540.1 See Comparison
CP067528.1 See Comparison
CP067523.1 See Comparison
CP067498.1 See Comparison
CP067493.1 See Comparison
CP067487.1 See Comparison
CP067471.1 See Comparison
CP067462.1 See Comparison
CP067446.1 See Comparison
NZ_CP021542.1 See Comparison
CP067942.1 See Comparison
CP067919.1 See Comparison
CP067894.1 See Comparison
CP080691.1 See Comparison
CP080655.1 See Comparison
NZ_CP021715.1 See Comparison
NZ_CP020839.1 See Comparison
NZ_CP020111.1 See Comparison
NZ_CP021836.1 See Comparison
CP021901.1 See Comparison
NZ_CP018951.1 See Comparison
NZ_CP020074.1 See Comparison
CP128733.1 See Comparison
NZ_CP018429.1 See Comparison
NZ_CP018435.1 See Comparison
NZ_CP018423.1 See Comparison
NZ_CP015825.1 See Comparison
NZ_CP011983.1 See Comparison
CP011992.1 See Comparison
NC_019157.1 See Comparison
NZ_CP043050.1 See Comparison
NZ_CP022575.1 See Comparison
NZ_CP135456.1 See Comparison
NZ_CP010395.1 See Comparison
JNBM01000003.1 See Comparison
NZ_LR130550.1 See Comparison
NZ_CP027057.1 See Comparison
NZ_CP027051.1 See Comparison
CP028182.1 See Comparison
NZ_CP136409.1 See Comparison
CP128768.1 See Comparison
CP128673.1 See Comparison
NZ_KX618697.1 See Comparison
NZ_CP149489.1 See Comparison
NZ_CP142912.1 See Comparison
NZ_CP070561.1 See Comparison
NZ_CP022694.2 See Comparison
NZ_CP070086.1 See Comparison
NZ_CP068606.1 See Comparison
NZ_CP068612.1 See Comparison
NZ_MT560074.1 See Comparison
NZ_MT560076.1 See Comparison
NZ_CP058328.1 See Comparison
NZ_CP115703.1 See Comparison
NZ_OP378666.1 See Comparison
NZ_CP074526.1 See Comparison
NZ_CP098359.1 See Comparison
OW969868.1 See Comparison
OW967425.1 See Comparison
OW967253.1 See Comparison
OW967234.1 See Comparison
OW967193.1 See Comparison
OW967170.1 See Comparison
NZ_CP110955.1 See Comparison
NZ_CP110945.1 See Comparison
NZ_CP110950.1 See Comparison
NZ_CP110965.1 See Comparison
NZ_CP110960.1 See Comparison
NZ_CP110939.1 See Comparison
OW967613.1 See Comparison
OW967604.1 See Comparison
OW967583.1 See Comparison
OW967370.1 See Comparison
NZ_CP074443.1 See Comparison
NZ_CP092757.1 See Comparison
NZ_CP092769.1 See Comparison
CP067869.1 See Comparison
CP067942.1 See Comparison
CP067834.1 See Comparison
CP067820.1 See Comparison
CP067784.1 See Comparison
CP067765.1 See Comparison
CP067772.1 See Comparison
CP067756.1 See Comparison
CP067740.1 See Comparison
CP067646.1 See Comparison
CP067641.1 See Comparison
CP067919.1 See Comparison
CP067635.1 See Comparison
CP067731.1 See Comparison
CP067727.1 See Comparison
CP067894.1 See Comparison
CP067625.1 See Comparison
CP067619.1 See Comparison
CP067875.1 See Comparison
CP067602.1 See Comparison
CP067597.1 See Comparison
CP067701.1 See Comparison
CP067487.1 See Comparison
CP067682.1 See Comparison
CP067471.1 See Comparison
CP067570.1 See Comparison
CP067462.1 See Comparison
CP067547.1 See Comparison
CP067446.1 See Comparison
CP067540.1 See Comparison
CP067528.1 See Comparison
CP080691.1 See Comparison
CP067523.1 See Comparison
CP067498.1 See Comparison
CP067493.1 See Comparison
CP080655.1 See Comparison
NZ_CP021836.1 See Comparison
CP021901.1 See Comparison
NZ_CP015825.1 See Comparison
NZ_CP021542.1 See Comparison
NZ_CP021715.1 See Comparison
NZ_CP020839.1 See Comparison
NZ_CP020111.1 See Comparison
NZ_CP020074.1 See Comparison
NZ_CP018951.1 See Comparison
NZ_CP018429.1 See Comparison
NZ_CP018435.1 See Comparison
NZ_CP010395.1 See Comparison
NZ_CP018423.1 See Comparison
NZ_CP011983.1 See Comparison
CP011992.1 See Comparison
JNBM01000003.1 See Comparison
NC_019157.1 See Comparison
NZ_CP043050.1 See Comparison
NZ_LR130550.1 See Comparison
NZ_CP027057.1 See Comparison
NZ_CP027051.1 See Comparison
CP028182.1 See Comparison
NZ_CP022575.1 See Comparison
NZ_CP135456.1 See Comparison
CP128733.1 See Comparison
NZ_CP136409.1 See Comparison
CP128768.1 See Comparison
CP128673.1 See Comparison
NZ_CP149489.1 See Comparison
NZ_CP142912.1 See Comparison
NZ_CP022694.2 See Comparison
NZ_KX618697.1 See Comparison
NZ_CP070086.1 See Comparison
NZ_CP070561.1 See Comparison
NZ_CP068606.1 See Comparison
NZ_CP068612.1 See Comparison
NZ_OP378666.1 See Comparison
NZ_MT560074.1 See Comparison
NZ_MT560076.1 See Comparison
NZ_CP058328.1 See Comparison
NZ_CP115703.1 See Comparison
NZ_CP074526.1 See Comparison
NZ_CP074443.1 See Comparison
OW967613.1 See Comparison
NZ_CP110955.1 See Comparison
NZ_CP110945.1 See Comparison
NZ_CP110950.1 See Comparison
NZ_CP110965.1 See Comparison
NZ_CP110960.1 See Comparison
NZ_CP110939.1 See Comparison
NZ_CP098359.1 See Comparison
OW969868.1 See Comparison
OW967604.1 See Comparison
OW967583.1 See Comparison
OW967253.1 See Comparison
OW967370.1 See Comparison
OW967234.1 See Comparison
OW967193.1 See Comparison
OW967170.1 See Comparison
CP067834.1 See Comparison
CP067942.1 See Comparison
OW967425.1 See Comparison
NZ_CP092757.1 See Comparison
NZ_CP092769.1 See Comparison
CP067820.1 See Comparison
CP067919.1 See Comparison
CP067784.1 See Comparison
CP067894.1 See Comparison
CP067731.1 See Comparison
CP067727.1 See Comparison
CP067765.1 See Comparison
CP067875.1 See Comparison
CP067772.1 See Comparison
CP067869.1 See Comparison
CP067756.1 See Comparison
CP067740.1 See Comparison
CP067701.1 See Comparison
CP067682.1 See Comparison
CP067646.1 See Comparison
CP067570.1 See Comparison
CP067641.1 See Comparison
CP067547.1 See Comparison
CP067635.1 See Comparison
CP067540.1 See Comparison
CP067625.1 See Comparison
CP067528.1 See Comparison
CP067619.1 See Comparison
CP067471.1 See Comparison
CP067523.1 See Comparison
CP067462.1 See Comparison
CP067602.1 See Comparison
CP067498.1 See Comparison
CP067597.1 See Comparison
CP067446.1 See Comparison
CP067493.1 See Comparison
CP067487.1 See Comparison
CP080655.1 See Comparison
NZ_CP021542.1 See Comparison
CP080691.1 See Comparison
NZ_CP021836.1 See Comparison
CP021901.1 See Comparison
NZ_CP021715.1 See Comparison
NZ_CP020839.1 See Comparison
NZ_CP020074.1 See Comparison
NZ_CP018423.1 See Comparison
NZ_CP020111.1 See Comparison
NZ_CP018951.1 See Comparison
NZ_CP018429.1 See Comparison
NZ_CP018435.1 See Comparison
NZ_CP015825.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore