Plasmid NZ_CP018423.1

Sequence

Nucleotide Information

Accession NZ_CP018423.1
Description Klebsiella pneumoniae strain MNCRE69 plasmid pMNCRE69_2, complete sequence
Source refseq
Topology circular
Length 45288 bp
GC Content 0.47 %
Created at NCBI Dec. 19, 2016



Assembly

Genome Data Information

Accession GCF_001902215.1
Assembly Coverage None


Biosample

Curated Collection Information
Accession 6067845

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 46.7296N;94.6859W
Original Query Type coordinates
Coordinates (Lat/Lon) 46.73/-94.69
Address 20th Street Southwest, Cass County, Minnesota, United States

ECOSYSTEM
Original Query Homo sapiens,urine
Classification host_associated,urinary_system
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

CP067919.1 See Comparison
CP067875.1 See Comparison
CP067820.1 See Comparison
CP067765.1 See Comparison
CP067756.1 See Comparison
CP067740.1 See Comparison
CP067701.1 See Comparison
CP067682.1 See Comparison
CP067641.1 See Comparison
CP067635.1 See Comparison
CP067619.1 See Comparison
CP067597.1 See Comparison
CP067547.1 See Comparison
CP067540.1 See Comparison
CP067471.1 See Comparison
CP067462.1 See Comparison
CP067446.1 See Comparison
NZ_CP083009.1 See Comparison
CP080655.1 See Comparison
NZ_CP021836.1 See Comparison
CP021901.1 See Comparison
NZ_CP021715.1 See Comparison
NZ_CP020111.1 See Comparison
NZ_CP020074.1 See Comparison
NZ_CP018951.1 See Comparison
NZ_CP018429.1 See Comparison
NZ_CP018435.1 See Comparison
NZ_CP011983.1 See Comparison
CP011992.1 See Comparison
NZ_CP010395.1 See Comparison
NZ_CP043050.1 See Comparison
NZ_LR130550.1 See Comparison
NZ_CP027057.1 See Comparison
NZ_CP027051.1 See Comparison
NZ_CP022575.1 See Comparison
NZ_CP136409.1 See Comparison
NZ_CP022694.2 See Comparison
CP128733.1 See Comparison
CP128768.1 See Comparison
CP128673.1 See Comparison
NZ_CP149489.1 See Comparison
NZ_CP068606.1 See Comparison
NZ_CP070086.1 See Comparison
NZ_CP074443.1 See Comparison
NZ_CP018429.1 See Comparison
CP067919.1 See Comparison
CP067875.1 See Comparison
CP067820.1 See Comparison
CP067765.1 See Comparison
CP067756.1 See Comparison
CP067740.1 See Comparison
CP067701.1 See Comparison
CP067682.1 See Comparison
CP067641.1 See Comparison
CP067635.1 See Comparison
CP067619.1 See Comparison
CP067597.1 See Comparison
CP067547.1 See Comparison
CP067540.1 See Comparison
CP067471.1 See Comparison
CP067462.1 See Comparison
CP067446.1 See Comparison
NZ_CP083009.1 See Comparison
CP080655.1 See Comparison
NZ_CP021836.1 See Comparison
CP021901.1 See Comparison
NZ_CP021715.1 See Comparison
NZ_CP020111.1 See Comparison
NZ_CP020074.1 See Comparison
NZ_CP018951.1 See Comparison
NZ_CP018435.1 See Comparison
NZ_CP011983.1 See Comparison
CP011992.1 See Comparison
NZ_CP010395.1 See Comparison
NZ_CP074443.1 See Comparison
NZ_LR130550.1 See Comparison
NZ_CP027057.1 See Comparison
NZ_CP027051.1 See Comparison
NZ_CP022575.1 See Comparison
CP128733.1 See Comparison
CP128768.1 See Comparison
CP128673.1 See Comparison
NZ_CP149489.1 See Comparison
NZ_CP022694.2 See Comparison
NZ_CP070086.1 See Comparison
NZ_CP043050.1 See Comparison
NZ_CP136409.1 See Comparison
NZ_CP068606.1 See Comparison
NZ_LR130550.1 See Comparison
CP067919.1 See Comparison
CP067875.1 See Comparison
CP067641.1 See Comparison
CP067635.1 See Comparison
CP067619.1 See Comparison
CP067597.1 See Comparison
CP067547.1 See Comparison
CP067540.1 See Comparison
CP080655.1 See Comparison
NZ_CP043050.1 See Comparison
CP067820.1 See Comparison
CP067765.1 See Comparison
CP067756.1 See Comparison
CP067740.1 See Comparison
CP067701.1 See Comparison
CP067682.1 See Comparison
CP067471.1 See Comparison
CP067462.1 See Comparison
CP067446.1 See Comparison
NZ_CP083009.1 See Comparison
NZ_CP021836.1 See Comparison
CP021901.1 See Comparison
NZ_CP021715.1 See Comparison
NZ_CP020111.1 See Comparison
NZ_CP020074.1 See Comparison
NZ_CP018951.1 See Comparison
NZ_CP018429.1 See Comparison
NZ_CP018435.1 See Comparison
NZ_CP011983.1 See Comparison
CP011992.1 See Comparison
NZ_CP010395.1 See Comparison
NZ_CP027057.1 See Comparison
NZ_CP022575.1 See Comparison
NZ_CP027051.1 See Comparison
NZ_CP068606.1 See Comparison
CP128768.1 See Comparison
CP128673.1 See Comparison
NZ_CP136409.1 See Comparison
CP128733.1 See Comparison
NZ_CP149489.1 See Comparison
NZ_CP022694.2 See Comparison
NZ_CP070086.1 See Comparison
CP067765.1 See Comparison
CP067919.1 See Comparison
CP067875.1 See Comparison
CP067820.1 See Comparison
CP067635.1 See Comparison
CP067619.1 See Comparison
NZ_CP074443.1 See Comparison
CP067597.1 See Comparison
CP067756.1 See Comparison
CP067740.1 See Comparison
CP067701.1 See Comparison
CP067547.1 See Comparison
CP067540.1 See Comparison
CP067682.1 See Comparison
CP067641.1 See Comparison
CP067471.1 See Comparison
CP067462.1 See Comparison
CP067446.1 See Comparison
NZ_CP083009.1 See Comparison
NZ_CP021836.1 See Comparison
CP080655.1 See Comparison
CP021901.1 See Comparison
NZ_LR130550.1 See Comparison
NZ_CP021715.1 See Comparison
NZ_CP020111.1 See Comparison
NZ_CP020074.1 See Comparison
NZ_CP018951.1 See Comparison
NZ_CP018429.1 See Comparison
NZ_CP018435.1 See Comparison
NZ_CP010395.1 See Comparison
NZ_CP043050.1 See Comparison
NZ_CP011983.1 See Comparison
CP011992.1 See Comparison
NZ_CP027057.1 See Comparison
NZ_CP022575.1 See Comparison
NZ_CP027051.1 See Comparison
NZ_CP022694.2 See Comparison
NZ_CP136409.1 See Comparison
CP128673.1 See Comparison
NZ_CP149489.1 See Comparison
CP128733.1 See Comparison
CP128768.1 See Comparison
NZ_CP068606.1 See Comparison
NZ_CP070086.1 See Comparison
CP067765.1 See Comparison
NZ_CP074443.1 See Comparison
CP067919.1 See Comparison
CP067756.1 See Comparison
CP067875.1 See Comparison
CP067619.1 See Comparison
CP067740.1 See Comparison
CP067597.1 See Comparison
CP067701.1 See Comparison
CP067547.1 See Comparison
CP067540.1 See Comparison
CP067820.1 See Comparison
CP067682.1 See Comparison
CP067641.1 See Comparison
CP067635.1 See Comparison
NZ_CP021715.1 See Comparison
NZ_CP083009.1 See Comparison
CP067471.1 See Comparison
CP067462.1 See Comparison
CP067446.1 See Comparison
CP080655.1 See Comparison
NZ_CP020111.1 See Comparison
NZ_CP021836.1 See Comparison
CP021901.1 See Comparison
NZ_CP020074.1 See Comparison
NZ_CP018951.1 See Comparison
NZ_CP018429.1 See Comparison
NZ_CP018435.1 See Comparison
NZ_CP010395.1 See Comparison
NZ_CP011983.1 See Comparison
CP011992.1 See Comparison
NZ_LR130550.1 See Comparison
NZ_CP043050.1 See Comparison
NZ_CP027057.1 See Comparison
NZ_CP027051.1 See Comparison
NZ_CP136409.1 See Comparison
NZ_CP022575.1 See Comparison
CP128733.1 See Comparison
CP128768.1 See Comparison
CP128673.1 See Comparison
NZ_CP068606.1 See Comparison
NZ_CP022694.2 See Comparison
NZ_CP070086.1 See Comparison
NZ_CP149489.1 See Comparison
NZ_CP074443.1 See Comparison
CP080655.1 See Comparison
CP067919.1 See Comparison
CP067875.1 See Comparison
CP067820.1 See Comparison
CP067765.1 See Comparison
CP067756.1 See Comparison
CP067740.1 See Comparison
CP067547.1 See Comparison
CP067540.1 See Comparison
CP067471.1 See Comparison
CP067462.1 See Comparison
CP067446.1 See Comparison
NZ_CP083009.1 See Comparison
CP067701.1 See Comparison
CP067682.1 See Comparison
CP067641.1 See Comparison
CP067635.1 See Comparison
CP067619.1 See Comparison
CP067597.1 See Comparison
NZ_CP021836.1 See Comparison
CP021901.1 See Comparison
NZ_CP021715.1 See Comparison
NZ_CP020111.1 See Comparison
NZ_CP020074.1 See Comparison
NZ_CP018951.1 See Comparison
NZ_CP018429.1 See Comparison
NZ_CP018435.1 See Comparison
NZ_CP018423.1 See Comparison
NZ_CP011983.1 See Comparison
CP011992.1 See Comparison
NZ_CP022575.1 See Comparison
NZ_CP010395.1 See Comparison
NZ_CP043050.1 See Comparison
NZ_LR130550.1 See Comparison
NZ_CP027057.1 See Comparison
NZ_CP027051.1 See Comparison
NZ_CP149489.1 See Comparison
NZ_CP136409.1 See Comparison
CP128733.1 See Comparison
CP128768.1 See Comparison
CP128673.1 See Comparison
NZ_CP068606.1 See Comparison
NZ_CP022694.2 See Comparison
NZ_CP070086.1 See Comparison
NZ_CP074443.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore