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v. 2024_05_31_v2
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Typing
Plasmid NZ_CP081013.1
Sequence
Nucleotide Information
Accession
NZ_CP081013.1
Description
Escherichia coli strain 25POL plasmid p25POL-C, complete sequence
Source
refseq
Topology
circular
Length
3173 bp
GC Content
0.47 %
Created at NCBI
Aug. 20, 2021
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Escherichia coli (562)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Escherichia (561)
Species
Escherichia_coli (562)
Strain
Assembly
Genome Data Information
Accession
GCF_019645975.1
Assembly Coverage
893
Biosample
Curated Collection Information
Accession
20701137
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
China,Jinan
Original Query Type
name
Coordinates (Lat/Lon)
36.65/117.11
Address
China,Jinan
ECOSYSTEM
Original Query
cell culture,LAB
Classification
anthropogenic,cell_culture,laboratory
Host-associated Taxon
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
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Plasmids from same Biosample
NZ_CP081014.1
NZ_CP081012.1
NZ_CP081011.1
Similar Plasmids
based on Mash distance
NZ_CP058218.1
See Comparison
NZ_OU342909.1
See Comparison
NZ_CP035488.1
See Comparison
NZ_CP101928.1
See Comparison
NZ_CP149503.1
See Comparison
NZ_CP148107.1
See Comparison
NZ_MW240712.1
See Comparison
NZ_CP066147.1
See Comparison
NZ_CP063985.1
See Comparison
NZ_CP117233.1
See Comparison
NZ_CP058218.1
See Comparison
NZ_CP069635.1
See Comparison
NZ_CP069632.1
See Comparison
NZ_CP069638.1
See Comparison
NZ_CP069623.1
See Comparison
NZ_CP069626.1
See Comparison
NZ_CP069641.1
See Comparison
NZ_CP069629.1
See Comparison
NZ_CP069644.1
See Comparison
NZ_CP148107.1
See Comparison
NZ_OU342909.1
See Comparison
NZ_CP035488.1
See Comparison
NZ_CP149503.1
See Comparison
NZ_CP058218.1
See Comparison
NZ_MW240712.1
See Comparison
NZ_CP066147.1
See Comparison
NZ_CP117233.1
See Comparison
NZ_CP101928.1
See Comparison
NZ_CP063985.1
See Comparison
NZ_CP069635.1
See Comparison
NZ_CP069632.1
See Comparison
NZ_CP069638.1
See Comparison
NZ_CP069623.1
See Comparison
NZ_CP069626.1
See Comparison
NZ_CP069641.1
See Comparison
NZ_CP069629.1
See Comparison
NZ_CP069644.1
See Comparison
NZ_CP035488.1
See Comparison
NZ_OU342909.1
See Comparison
NZ_CP148107.1
See Comparison
NZ_CP149503.1
See Comparison
NZ_MW240712.1
See Comparison
NZ_CP066147.1
See Comparison
NZ_CP063985.1
See Comparison
NZ_CP058218.1
See Comparison
NZ_CP101928.1
See Comparison
NZ_CP069635.1
See Comparison
NZ_CP069632.1
See Comparison
NZ_CP069638.1
See Comparison
NZ_CP069623.1
See Comparison
NZ_CP069626.1
See Comparison
NZ_CP069641.1
See Comparison
NZ_CP069629.1
See Comparison
NZ_CP069644.1
See Comparison
NZ_CP117233.1
See Comparison
NZ_CP149503.1
See Comparison
NZ_OU342909.1
See Comparison
NZ_CP035488.1
See Comparison
NZ_CP101928.1
See Comparison
NZ_CP066147.1
See Comparison
NZ_CP063985.1
See Comparison
NZ_CP148107.1
See Comparison
NZ_MW240712.1
See Comparison
NZ_CP117233.1
See Comparison
NZ_CP069635.1
See Comparison
NZ_CP069638.1
See Comparison
NZ_CP069623.1
See Comparison
NZ_CP069626.1
See Comparison
NZ_CP069641.1
See Comparison
NZ_CP069629.1
See Comparison
NZ_CP069644.1
See Comparison
NZ_CP069632.1
See Comparison
NZ_CP149503.1
See Comparison
NZ_CP058218.1
See Comparison
NZ_OU342909.1
See Comparison
NZ_CP035488.1
See Comparison
NZ_CP066147.1
See Comparison
NZ_CP148107.1
See Comparison
NZ_MW240712.1
See Comparison
NZ_CP117233.1
See Comparison
NZ_CP063985.1
See Comparison
NZ_CP058218.1
See Comparison
NZ_CP069635.1
See Comparison
NZ_CP069632.1
See Comparison
NZ_CP069638.1
See Comparison
NZ_CP069623.1
See Comparison
NZ_CP069626.1
See Comparison
NZ_CP069641.1
See Comparison
NZ_CP069629.1
See Comparison
NZ_CP069644.1
See Comparison
NZ_CP101928.1
See Comparison
NZ_CP149503.1
See Comparison
NZ_CP081013.1
See Comparison
NZ_OU342909.1
See Comparison
NZ_CP035488.1
See Comparison
NZ_CP148107.1
See Comparison
NZ_MW240712.1
See Comparison
NZ_CP066147.1
See Comparison
NZ_CP063985.1
See Comparison
NZ_CP101928.1
See Comparison
NZ_CP069635.1
See Comparison
NZ_CP069632.1
See Comparison
NZ_CP117233.1
See Comparison
NZ_CP069638.1
See Comparison
NZ_CP069623.1
See Comparison
NZ_CP069626.1
See Comparison
NZ_CP069641.1
See Comparison
NZ_CP069629.1
See Comparison
NZ_CP069644.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
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NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore