Plasmid NZ_CP069641.1

Sequence

Nucleotide Information

Accession NZ_CP069641.1
Description Escherichia coli strain SSGNw1 plasmid pMUT1, complete sequence
Source refseq
Topology circular
Length 3173 bp
GC Content 0.47 %
Created at NCBI May 3, 2022



Assembly

Genome Data Information

Accession GCF_023206715.1
Assembly Coverage 25.6


Biosample

Curated Collection Information
Accession 17732902

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query USA,Boston,MA
Original Query Type name
Coordinates (Lat/Lon) 42.36/-71.06
Address USA,Boston,MA

ECOSYSTEM
Original Query cell culture,laboratory evolution
Classification anthropogenic,cell_culture,construction
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_MW240712.1 See Comparison
NZ_CP066147.1 See Comparison
NZ_CP063985.1 See Comparison
NZ_CP117233.1 See Comparison
NZ_CP101928.1 See Comparison
NZ_CP069635.1 See Comparison
NZ_CP069632.1 See Comparison
NZ_CP069638.1 See Comparison
NZ_CP069623.1 See Comparison
NZ_CP069626.1 See Comparison
NZ_CP069641.1 See Comparison
NZ_CP069629.1 See Comparison
NZ_CP069644.1 See Comparison
NZ_CP058218.1 See Comparison
NZ_CP035488.1 See Comparison
NZ_OU342909.1 See Comparison
NZ_CP081013.1 See Comparison
NZ_CP058218.1 See Comparison
NZ_CP148107.1 See Comparison
NZ_MW240712.1 See Comparison
NZ_CP066147.1 See Comparison
NZ_CP063985.1 See Comparison
NZ_CP117233.1 See Comparison
NZ_CP069635.1 See Comparison
NZ_CP069632.1 See Comparison
NZ_CP069638.1 See Comparison
NZ_CP069623.1 See Comparison
NZ_CP069626.1 See Comparison
NZ_CP069629.1 See Comparison
NZ_CP069644.1 See Comparison
NZ_CP149503.1 See Comparison
NZ_CP101928.1 See Comparison
NZ_MW240712.1 See Comparison
NZ_CP035488.1 See Comparison
NZ_CP149503.1 See Comparison
NZ_CP148107.1 See Comparison
NZ_CP081013.1 See Comparison
NZ_OU342909.1 See Comparison
NZ_CP066147.1 See Comparison
NZ_CP063985.1 See Comparison
NZ_CP117233.1 See Comparison
NZ_CP117233.1 See Comparison
NZ_CP058218.1 See Comparison
NZ_CP081013.1 See Comparison
NZ_OU342909.1 See Comparison
NZ_CP035488.1 See Comparison
NZ_CP148107.1 See Comparison
NZ_MW240712.1 See Comparison
NZ_CP066147.1 See Comparison
NZ_CP101928.1 See Comparison
NZ_CP069635.1 See Comparison
NZ_CP069632.1 See Comparison
NZ_CP069638.1 See Comparison
NZ_CP069623.1 See Comparison
NZ_CP069626.1 See Comparison
NZ_CP069629.1 See Comparison
NZ_CP069644.1 See Comparison
NZ_CP149503.1 See Comparison
NZ_CP063985.1 See Comparison
NZ_CP058218.1 See Comparison
NZ_CP069635.1 See Comparison
NZ_CP069632.1 See Comparison
NZ_CP069638.1 See Comparison
NZ_CP069623.1 See Comparison
NZ_CP069626.1 See Comparison
NZ_CP069629.1 See Comparison
NZ_CP069644.1 See Comparison
NZ_CP101928.1 See Comparison
NZ_CP081013.1 See Comparison
NZ_CP035488.1 See Comparison
NZ_OU342909.1 See Comparison
NZ_CP148107.1 See Comparison
NZ_CP149503.1 See Comparison
NZ_CP081013.1 See Comparison
NZ_CP058218.1 See Comparison
NZ_OU342909.1 See Comparison
NZ_CP148107.1 See Comparison
NZ_CP063985.1 See Comparison
NZ_CP117233.1 See Comparison
NZ_CP069638.1 See Comparison
NZ_CP069623.1 See Comparison
NZ_CP069626.1 See Comparison
NZ_CP069629.1 See Comparison
NZ_CP069644.1 See Comparison
NZ_MW240712.1 See Comparison
NZ_CP066147.1 See Comparison
NZ_CP063985.1 See Comparison
NZ_CP117233.1 See Comparison
NZ_CP101928.1 See Comparison
NZ_CP069635.1 See Comparison
NZ_CP069632.1 See Comparison
NZ_CP069638.1 See Comparison
NZ_CP069623.1 See Comparison
NZ_CP069626.1 See Comparison
NZ_CP069629.1 See Comparison
NZ_CP069644.1 See Comparison
NZ_CP081013.1 See Comparison
NZ_CP035488.1 See Comparison
NZ_CP149503.1 See Comparison
NZ_MW240712.1 See Comparison
NZ_CP066147.1 See Comparison
NZ_CP101928.1 See Comparison
NZ_CP069635.1 See Comparison
NZ_CP069632.1 See Comparison
NZ_CP058218.1 See Comparison
NZ_CP149503.1 See Comparison
NZ_CP035488.1 See Comparison
NZ_OU342909.1 See Comparison
NZ_CP148107.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore