Plasmid NZ_CP080310.1

Sequence

Nucleotide Information

Accession NZ_CP080310.1
Description Klebsiella pneumoniae strain KP-426 plasmid p426-Vir, complete sequence
Source refseq
Topology circular
Length 188058 bp
GC Content 0.50 %
Created at NCBI Aug. 4, 2021



Assembly

Genome Data Information

Accession GCF_019434255.1
Assembly Coverage 200


Biosample

Curated Collection Information
Accession 20373013

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query China,Hangzhou
Original Query Type name
Coordinates (Lat/Lon) 30.25/120.21
Address China,Hangzhou

ECOSYSTEM
Original Query Homo sapiens,mixed culture
Classification cell_culture,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP031935.1 See Comparison
NZ_MN182749.1 See Comparison
NZ_CP102638.1 See Comparison
NZ_CP087143.1 See Comparison
NZ_CP087624.1 See Comparison
NZ_CP095241.1 See Comparison
NZ_CP087147.1 See Comparison
NZ_CP087152.1 See Comparison
NZ_CP092794.1 See Comparison
NZ_CP092787.1 See Comparison
NZ_CP136844.1 See Comparison
NZ_CP080304.1 See Comparison
NZ_CP080298.1 See Comparison
NZ_CP041374.1 See Comparison
NZ_CP066152.1 See Comparison
NZ_CP082760.1 See Comparison
NZ_CP082766.1 See Comparison
NZ_CP055295.1 See Comparison
NZ_CP033955.1 See Comparison
NZ_CP136268.1 See Comparison
NZ_CP133402.1 See Comparison
NZ_CP082760.1 See Comparison
NZ_CP141069.1 See Comparison
NZ_MN182749.1 See Comparison
NZ_CP087143.1 See Comparison
NZ_CP066152.1 See Comparison
NZ_CP154345.1 See Comparison
NZ_CP144304.1 See Comparison
NZ_CP031935.1 See Comparison
NZ_CP102638.1 See Comparison
NZ_CP087624.1 See Comparison
NZ_CP095241.1 See Comparison
NZ_CP087147.1 See Comparison
NZ_CP087152.1 See Comparison
NZ_CP092794.1 See Comparison
NZ_CP092787.1 See Comparison
NZ_CP082766.1 See Comparison
NZ_CP080304.1 See Comparison
NZ_CP080298.1 See Comparison
NZ_CP080310.1 See Comparison
NZ_CP031935.1 See Comparison
NZ_CP041374.1 See Comparison
NZ_CP033955.1 See Comparison
NZ_CP136844.1 See Comparison
NZ_CP133402.1 See Comparison
NZ_CP154345.1 See Comparison
NZ_CP144304.1 See Comparison
NZ_CP055295.1 See Comparison
NZ_CP136268.1 See Comparison
NZ_CP141069.1 See Comparison
NZ_CP102638.1 See Comparison
NZ_MN182749.1 See Comparison
NZ_CP087624.1 See Comparison
NZ_CP095241.1 See Comparison
NZ_CP082760.1 See Comparison
NZ_CP066152.1 See Comparison
NZ_CP087143.1 See Comparison
NZ_CP087147.1 See Comparison
NZ_CP087152.1 See Comparison
NZ_CP092794.1 See Comparison
NZ_CP092787.1 See Comparison
NZ_CP082766.1 See Comparison
NZ_CP041374.1 See Comparison
NZ_CP055295.1 See Comparison
NZ_CP080304.1 See Comparison
NZ_CP080298.1 See Comparison
NZ_CP136268.1 See Comparison
NZ_CP033955.1 See Comparison
NZ_CP136844.1 See Comparison
NZ_CP141069.1 See Comparison
NZ_CP133402.1 See Comparison
NZ_CP144304.1 See Comparison
NZ_CP154345.1 See Comparison
NZ_MN182749.1 See Comparison
NZ_CP031935.1 See Comparison
NZ_CP087624.1 See Comparison
NZ_CP102638.1 See Comparison
NZ_CP095241.1 See Comparison
NZ_CP087143.1 See Comparison
NZ_CP087147.1 See Comparison
NZ_CP087152.1 See Comparison
NZ_CP092787.1 See Comparison
NZ_CP082760.1 See Comparison
NZ_CP092794.1 See Comparison
NZ_CP066152.1 See Comparison
NZ_CP082766.1 See Comparison
NZ_CP136844.1 See Comparison
NZ_CP055295.1 See Comparison
NZ_CP033955.1 See Comparison
NZ_CP080304.1 See Comparison
NZ_CP080298.1 See Comparison
NZ_CP041374.1 See Comparison
NZ_CP133402.1 See Comparison
NZ_CP136268.1 See Comparison
NZ_CP154345.1 See Comparison
NZ_CP144304.1 See Comparison
NZ_CP066152.1 See Comparison
NZ_CP141069.1 See Comparison
NZ_CP031935.1 See Comparison
NZ_CP087143.1 See Comparison
NZ_CP092794.1 See Comparison
NZ_CP092787.1 See Comparison
NZ_MN182749.1 See Comparison
NZ_CP102638.1 See Comparison
NZ_CP087624.1 See Comparison
NZ_CP095241.1 See Comparison
NZ_CP087147.1 See Comparison
NZ_CP087152.1 See Comparison
NZ_CP080304.1 See Comparison
NZ_CP082760.1 See Comparison
NZ_CP082766.1 See Comparison
NZ_CP080298.1 See Comparison
NZ_CP033955.1 See Comparison
NZ_CP041374.1 See Comparison
NZ_CP055295.1 See Comparison
NZ_CP133402.1 See Comparison
NZ_CP136844.1 See Comparison
NZ_CP136268.1 See Comparison
NZ_CP141069.1 See Comparison
NZ_CP144304.1 See Comparison
NZ_CP154345.1 See Comparison
NZ_CP087143.1 See Comparison
NZ_CP031935.1 See Comparison
NZ_CP102638.1 See Comparison
NZ_MN182749.1 See Comparison
NZ_CP087624.1 See Comparison
NZ_CP095241.1 See Comparison
NZ_CP087147.1 See Comparison
NZ_CP087152.1 See Comparison
NZ_CP092794.1 See Comparison
NZ_CP092787.1 See Comparison
NZ_CP082760.1 See Comparison
NZ_CP066152.1 See Comparison
NZ_CP082766.1 See Comparison
NZ_CP033955.1 See Comparison
NZ_CP080304.1 See Comparison
NZ_CP080298.1 See Comparison
NZ_CP041374.1 See Comparison
NZ_CP055295.1 See Comparison
NZ_CP136844.1 See Comparison
NZ_CP133402.1 See Comparison
NZ_CP136268.1 See Comparison
NZ_CP154345.1 See Comparison
NZ_CP144304.1 See Comparison
NZ_CP141069.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Biosynthetic Gene Clusters

based on ANTISMASH

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore