Plasmid NZ_CP071256.1

Sequence

Nucleotide Information

Accession	NZ_CP071256.1
Description	Klebsiella pneumoniae strain MEI006 plasmid p4_IncR, complete sequence
Source	refseq
Topology	circular
Length	56333 bp
GC Content	0.54 %
Created at NCBI	June 2, 2022

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Klebsiella pneumoniae (573)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Klebsiella (570)
Species	Klebsiella_pneumoniae (573)
Strain

Assembly

Genome Data Information

Accession	GCF_023612395.1
Assembly Coverage	100

Biosample

Curated Collection Information

Accession	18062624

PLASMID INFORMATION

Genotype	ST3251

GEOGRAPHICAL INFORMATION

Original Query	Switzerland,Bern
Original Query Type	name
Coordinates (Lat/Lon)	46.95/7.45
Address	Switzerland,Bern

ECOSYSTEM

Original Query	Pure culture,Outdoors environment of a veterinary clinic
Classification	cell_culture
Host-associated Taxon

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_CP049718.1	See Comparison
NZ_CP049955.1	See Comparison
NZ_CP039961.1	See Comparison
NZ_CP039949.1	See Comparison
NZ_CP039937.1	See Comparison
NZ_CP039958.1	See Comparison
NZ_CP039943.1	See Comparison
NZ_CP039946.1	See Comparison
OX030700.1	See Comparison
NZ_LT994837.1	See Comparison
CP135472.1	See Comparison
NZ_LR822053.1	See Comparison
OX030700.1	See Comparison
NZ_CP126333.1	See Comparison
NZ_CP039961.1	See Comparison
NZ_CP039949.1	See Comparison
NZ_CP039937.1	See Comparison
NZ_CP039958.1	See Comparison
NZ_CP039943.1	See Comparison
NZ_CP039946.1	See Comparison
NZ_CP049718.1	See Comparison
NZ_CP049955.1	See Comparison
NZ_LT994837.1	See Comparison
CP135472.1	See Comparison
NZ_LR822053.1	See Comparison
NZ_LT994837.1	See Comparison
NZ_CP126333.1	See Comparison
NZ_CP039946.1	See Comparison
NZ_LT994837.1	See Comparison
NZ_CP071256.1	See Comparison
NZ_CP126333.1	See Comparison
NZ_CP049718.1	See Comparison
NZ_CP049955.1	See Comparison
NZ_CP039961.1	See Comparison
NZ_CP039949.1	See Comparison
NZ_CP039937.1	See Comparison
NZ_CP039958.1	See Comparison
NZ_CP039943.1	See Comparison
NZ_CP039946.1	See Comparison
NZ_CP049718.1	See Comparison
NZ_CP049955.1	See Comparison
NZ_CP039961.1	See Comparison
NZ_CP039949.1	See Comparison
NZ_CP039937.1	See Comparison
NZ_CP039958.1	See Comparison
NZ_CP039943.1	See Comparison
OX030700.1	See Comparison
NZ_LR822053.1	See Comparison
CP135472.1	See Comparison
OX030700.1	See Comparison
NZ_LR822053.1	See Comparison
CP135472.1	See Comparison
NZ_LR822053.1	See Comparison
NZ_CP049955.1	See Comparison
NZ_CP039961.1	See Comparison
NZ_CP039949.1	See Comparison
NZ_CP126333.1	See Comparison
NZ_CP049718.1	See Comparison
NZ_CP039937.1	See Comparison
NZ_CP039958.1	See Comparison
NZ_CP039943.1	See Comparison
NZ_CP039946.1	See Comparison
NZ_LT994837.1	See Comparison
OX030700.1	See Comparison
NZ_CP039958.1	See Comparison
CP135472.1	See Comparison
NZ_CP126333.1	See Comparison
NZ_CP039943.1	See Comparison
NZ_CP039946.1	See Comparison
OX030700.1	See Comparison
NZ_CP049718.1	See Comparison
NZ_CP049955.1	See Comparison
NZ_LT994837.1	See Comparison
NZ_CP039961.1	See Comparison
NZ_CP039949.1	See Comparison
NZ_CP039937.1	See Comparison
CP135472.1	See Comparison
NZ_LR822053.1	See Comparison
NZ_CP126333.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)
NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore