Plasmid NZ_CP070987.1

Sequence

Nucleotide Information

Accession	NZ_CP070987.1
Description	Staphylococcus aureus strain WBG8287 plasmid pWBG750, complete sequence
Source	refseq
Topology	circular
Length	19830 bp
GC Content	0.28 %
Created at NCBI	March 5, 2021

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Staphylococcus aureus (1280)

Lineage

Superkingdom	Bacteria (2)
Phylum	Bacillota (1239)
Class	Bacilli (91061)
Order	Bacillales (1385)
Family	Staphylococcaceae (90964)
Genus	Staphylococcus (1279)
Species	Staphylococcus_aureus (1280)
Strain

Assembly

Genome Data Information

Accession	GCF_017088305.1
Assembly Coverage	306

Biosample

Curated Collection Information

Accession	14225426

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	Australia, 6000, Western Australia, City of Perth, Perth, Wellington Street, 197,Royal Perth Hospital
Original Query Type	name
Coordinates (Lat/Lon)	-31.95/115.87
Address	Australia, 6000, Western Australia, City of Perth, Perth, Wellington Street, 197,Royal Perth Hospital

ECOSYSTEM

Original Query	None
Classification	None
Host-associated Taxon

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_CP062438.1	See Comparison
NZ_CP062349.1	See Comparison
NZ_CP080002.1	See Comparison
NC_013303.1	See Comparison
NC_013290.1	See Comparison
NC_005951.1	See Comparison
CP127630.1	See Comparison
CP127593.1	See Comparison
CP127574.1	See Comparison
CP127550.1	See Comparison
CP151892.1	See Comparison
CP127808.1	See Comparison
CP127703.1	See Comparison
CP127682.1	See Comparison
CP127685.1	See Comparison
NC_013290.1	See Comparison
NZ_CP062349.1	See Comparison
NZ_CP149806.1	See Comparison
NZ_MH785247.1	See Comparison
NZ_MH785254.1	See Comparison
NZ_CP062438.1	See Comparison
NZ_CP080002.1	See Comparison
CP127808.1	See Comparison
NC_013303.1	See Comparison
NC_005951.1	See Comparison
CP127703.1	See Comparison
CP127682.1	See Comparison
CP127685.1	See Comparison
CP151892.1	See Comparison
CP127630.1	See Comparison
CP127593.1	See Comparison
CP127574.1	See Comparison
CP127550.1	See Comparison
NZ_CP070987.1	See Comparison
NZ_CP149806.1	See Comparison
NZ_MH785247.1	See Comparison
NZ_MH785254.1	See Comparison
NZ_CP062438.1	See Comparison
NZ_CP062349.1	See Comparison
NC_005951.1	See Comparison
NC_013303.1	See Comparison
NC_013290.1	See Comparison
NZ_CP080002.1	See Comparison
CP127703.1	See Comparison
CP127682.1	See Comparison
CP127685.1	See Comparison
CP127550.1	See Comparison
CP127630.1	See Comparison
CP127593.1	See Comparison
CP127808.1	See Comparison
CP127574.1	See Comparison
NZ_CP149806.1	See Comparison
CP151892.1	See Comparison
NZ_CP062349.1	See Comparison
NZ_MH785247.1	See Comparison
NZ_MH785254.1	See Comparison
NZ_CP062438.1	See Comparison
CP127703.1	See Comparison
NZ_CP080002.1	See Comparison
NC_013303.1	See Comparison
NC_013290.1	See Comparison
NC_005951.1	See Comparison
CP127682.1	See Comparison
CP127685.1	See Comparison
CP127630.1	See Comparison
CP127593.1	See Comparison
CP127574.1	See Comparison
CP127808.1	See Comparison
CP127550.1	See Comparison
NZ_CP149806.1	See Comparison
CP151892.1	See Comparison
NZ_CP062438.1	See Comparison
NZ_MH785247.1	See Comparison
NZ_MH785254.1	See Comparison
CP151892.1	See Comparison
NZ_CP080002.1	See Comparison
NC_013303.1	See Comparison
NC_013290.1	See Comparison
NC_005951.1	See Comparison
CP127703.1	See Comparison
CP127682.1	See Comparison
CP127685.1	See Comparison
CP127630.1	See Comparison
CP127593.1	See Comparison
CP127574.1	See Comparison
CP127550.1	See Comparison
NZ_CP062349.1	See Comparison
CP127808.1	See Comparison
NZ_CP062349.1	See Comparison
NZ_MH785247.1	See Comparison
NZ_MH785254.1	See Comparison
NZ_CP062438.1	See Comparison
NZ_CP149806.1	See Comparison
CP127682.1	See Comparison
NZ_CP080002.1	See Comparison
NC_013303.1	See Comparison
NC_013290.1	See Comparison
NC_005951.1	See Comparison
CP127685.1	See Comparison
CP127630.1	See Comparison
CP127593.1	See Comparison
CP127808.1	See Comparison
CP127574.1	See Comparison
CP127550.1	See Comparison
NZ_CP149806.1	See Comparison
CP127703.1	See Comparison
CP151892.1	See Comparison
NC_013303.1	See Comparison
NZ_CP062438.1	See Comparison
NZ_CP080002.1	See Comparison
NZ_MH785247.1	See Comparison
NZ_MH785254.1	See Comparison
NZ_CP062349.1	See Comparison
NC_013290.1	See Comparison
CP127682.1	See Comparison
NC_005951.1	See Comparison
CP127808.1	See Comparison
CP127685.1	See Comparison
CP127630.1	See Comparison
CP127703.1	See Comparison
CP127593.1	See Comparison
CP127574.1	See Comparison
CP127550.1	See Comparison
NZ_CP149806.1	See Comparison
CP151892.1	See Comparison
NZ_MH785247.1	See Comparison
NZ_MH785254.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)
NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)

Biosynthetic Gene Clusters

based on ANTISMASH

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore

Detected typing markers by plasmidfinder

NUCCORE ACC	Typing	Identity	Coverage	Start	End	Strand	HSP length	Template length	Position in ref	Positions in Contig	Note	Accession	Hit id	Organism L1	Organism L2
NUCCORE ACC	Typing	Identity	Coverage	Start	End	Strand	HSP length	Template length	Position in ref	Positions in Contig	Note	Accession	Hit id	Organism L1	Organism L2