Plasmid NZ_CP069555.1

Sequence

Nucleotide Information

Accession	NZ_CP069555.1
Description	Escherichia coli strain FDAARGOS_1253 plasmid unnamed6, complete sequence
Source	refseq
Topology	circular
Length	5251 bp
GC Content	0.49 %
Created at NCBI	Feb. 16, 2021

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Escherichia coli (562)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Escherichia (561)
Species	Escherichia_coli (562)
Strain

Assembly

Genome Data Information

Accession	GCF_016889865.1
Assembly Coverage	1090.86

Biosample

Curated Collection Information

Accession	16357395

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	USA,WA
Original Query Type	name
Coordinates (Lat/Lon)	47.29/-120.21
Address	USA,WA

ECOSYSTEM

Original Query	Homo sapiens
Classification	host_associated
Host-associated Taxon	Homo sapiens (9606)

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_CP110639.1	See Comparison
NZ_CP103617.1	See Comparison
NZ_CP102550.1	See Comparison
NZ_CP101882.1	See Comparison
NZ_CP054976.1	See Comparison
NZ_CP083065.1	See Comparison
NZ_CP079662.1	See Comparison
NZ_CP079696.1	See Comparison
NZ_CP079650.1	See Comparison
NZ_CP079622.1	See Comparison
NZ_CP079177.1	See Comparison
NZ_CP079119.1	See Comparison
NZ_CP110639.1	See Comparison
NZ_CP045021.1	See Comparison
NZ_CP024043.1	See Comparison
NZ_CP135702.1	See Comparison
CP128714.1	See Comparison
NZ_OP378660.1	See Comparison
NZ_CP104801.1	See Comparison
NZ_CP029589.1	See Comparison
NZ_CP029592.1	See Comparison
NZ_CP069585.1	See Comparison
NZ_CP069492.1	See Comparison
NZ_CP069457.1	See Comparison
NZ_LR890626.1	See Comparison
NZ_CP079662.1	See Comparison
NZ_CP102550.1	See Comparison
NZ_CP054976.1	See Comparison
NZ_CP083065.1	See Comparison
NZ_CP103617.1	See Comparison
NZ_CP101882.1	See Comparison
NZ_CP079696.1	See Comparison
NZ_CP079650.1	See Comparison
NZ_CP079622.1	See Comparison
NZ_CP083065.1	See Comparison
NZ_CP079177.1	See Comparison
NZ_CP079119.1	See Comparison
NZ_CP045021.1	See Comparison
NZ_CP029589.1	See Comparison
NZ_CP029592.1	See Comparison
NZ_CP135702.1	See Comparison
CP128714.1	See Comparison
NZ_CP069585.1	See Comparison
NZ_CP069492.1	See Comparison
NZ_CP069457.1	See Comparison
NZ_OP378660.1	See Comparison
NZ_CP103617.1	See Comparison
NZ_CP102550.1	See Comparison
NZ_CP024043.1	See Comparison
NZ_LR890626.1	See Comparison
NZ_CP104801.1	See Comparison
NZ_CP110639.1	See Comparison
NZ_CP101882.1	See Comparison
NZ_CP054976.1	See Comparison
NZ_CP079662.1	See Comparison
NZ_CP079650.1	See Comparison
NZ_CP079622.1	See Comparison
NZ_CP079696.1	See Comparison
NZ_CP045021.1	See Comparison
NZ_CP079177.1	See Comparison
NZ_CP079119.1	See Comparison
NZ_CP029589.1	See Comparison
NZ_CP029592.1	See Comparison
NZ_CP069585.1	See Comparison
NZ_CP024043.1	See Comparison
NZ_CP135702.1	See Comparison
CP128714.1	See Comparison
NZ_CP069492.1	See Comparison
NZ_CP069457.1	See Comparison
NZ_OP378660.1	See Comparison
NZ_LR890626.1	See Comparison
NZ_CP110639.1	See Comparison
NZ_CP104801.1	See Comparison
NZ_CP054976.1	See Comparison
NZ_CP103617.1	See Comparison
NZ_CP102550.1	See Comparison
NZ_CP101882.1	See Comparison
NZ_CP079662.1	See Comparison
NZ_CP083065.1	See Comparison
NZ_CP079650.1	See Comparison
NZ_CP079622.1	See Comparison
NZ_CP079177.1	See Comparison
NZ_CP079119.1	See Comparison
NZ_CP079696.1	See Comparison
CP128714.1	See Comparison
NZ_CP045021.1	See Comparison
NZ_CP135702.1	See Comparison
NZ_CP029589.1	See Comparison
NZ_CP029592.1	See Comparison
NZ_CP024043.1	See Comparison
NZ_LR890626.1	See Comparison
NZ_CP069585.1	See Comparison
NZ_CP069492.1	See Comparison
NZ_CP069457.1	See Comparison
NZ_CP069555.1	See Comparison
NZ_CP104801.1	See Comparison
NZ_CP103617.1	See Comparison
NZ_CP110639.1	See Comparison
NZ_CP102550.1	See Comparison
NZ_CP079650.1	See Comparison
NZ_CP101882.1	See Comparison
NZ_OP378660.1	See Comparison
NZ_CP054976.1	See Comparison
NZ_CP083065.1	See Comparison
NZ_CP079662.1	See Comparison
NZ_CP079696.1	See Comparison
NZ_CP079622.1	See Comparison
NZ_CP079177.1	See Comparison
NZ_CP079119.1	See Comparison
NZ_CP029589.1	See Comparison
NZ_CP045021.1	See Comparison
NZ_CP024043.1	See Comparison
NZ_CP135702.1	See Comparison
NZ_CP069585.1	See Comparison
NZ_CP069492.1	See Comparison
NZ_CP069457.1	See Comparison
NZ_LR890626.1	See Comparison
NZ_CP110639.1	See Comparison
NZ_CP102550.1	See Comparison
NZ_CP079662.1	See Comparison
NZ_CP079696.1	See Comparison
NZ_CP079650.1	See Comparison
NZ_CP079622.1	See Comparison
NZ_CP079177.1	See Comparison
NZ_CP029589.1	See Comparison
NZ_CP029592.1	See Comparison
CP128714.1	See Comparison
NZ_OP378660.1	See Comparison
NZ_CP104801.1	See Comparison
NZ_CP103617.1	See Comparison
NZ_CP101882.1	See Comparison
NZ_CP054976.1	See Comparison
NZ_CP083065.1	See Comparison
NZ_CP079119.1	See Comparison
NZ_CP029592.1	See Comparison
NZ_CP024043.1	See Comparison
CP128714.1	See Comparison
NZ_CP045021.1	See Comparison
NZ_CP135702.1	See Comparison
NZ_CP069492.1	See Comparison
NZ_CP069457.1	See Comparison
NZ_CP104801.1	See Comparison
NZ_CP069585.1	See Comparison
NZ_LR890626.1	See Comparison
NZ_OP378660.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore