Plasmid NZ_CP065555.1

Sequence

Nucleotide Information

Accession NZ_CP065555.1
Description Klebsiella pneumoniae strain FK 6768 plasmid unnamed1, complete sequence
Source refseq
Topology circular
Length 219459 bp
GC Content 0.50 %
Created at NCBI Dec. 18, 2021



Assembly

Genome Data Information

Accession GCF_015999625.1
Assembly Coverage 50


Biosample

Curated Collection Information
Accession 17005574

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 28.01N;120.65E
Original Query Type coordinates
Coordinates (Lat/Lon) 28.01/120.65
Address 人民西路, 桦组团, Songtai, Lucheng District, Wenzhou, Zhejiang, 325003, China

ECOSYSTEM
Original Query Homo sapiens,feces
Classification fecal,gastrointestinal_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)
Host-associated Age 45
Host-associated Sex male

DISEASE
Original Query multiple injuries, traumatic brain herniation
DOID/SYMP
  • Traumatic brain injury (DOID:0081292 )
    • A brain disease that is characterized by brain dysfunction caused by an outside force, usually a violent blow to the head.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

CP139238.1 See Comparison
CP139220.1 See Comparison
NZ_CP127154.1 See Comparison
NZ_CP125344.1 See Comparison
NZ_CP154394.1 See Comparison
NZ_CP152444.1 See Comparison
NZ_CP047193.1 See Comparison
NZ_CP032241.1 See Comparison
NZ_CP063760.1 See Comparison
NZ_CP116492.1 See Comparison
NZ_CP064224.1 See Comparison
NZ_CP107292.1 See Comparison
NZ_CP107298.1 See Comparison
NZ_CP103316.1 See Comparison
NZ_OM791346.1 See Comparison
NZ_CP090206.1 See Comparison
NZ_CP072558.1 See Comparison
NZ_CP087664.1 See Comparison
NZ_CP087658.1 See Comparison
NZ_CP087652.1 See Comparison
NZ_CP102187.1 See Comparison
NZ_MZ546617.1 See Comparison
NZ_CP091069.1 See Comparison
NZ_CP125344.1 See Comparison
NZ_CP078124.1 See Comparison
CP139238.1 See Comparison
CP139220.1 See Comparison
NZ_CP127154.1 See Comparison
NZ_CP047193.1 See Comparison
NZ_CP154394.1 See Comparison
NZ_CP152444.1 See Comparison
NZ_CP032241.1 See Comparison
NZ_CP107292.1 See Comparison
NZ_CP064224.1 See Comparison
NZ_CP107298.1 See Comparison
NZ_CP063760.1 See Comparison
NZ_CP116492.1 See Comparison
NZ_OM791346.1 See Comparison
NZ_CP072558.1 See Comparison
NZ_CP103316.1 See Comparison
NZ_CP102187.1 See Comparison
NZ_MZ546617.1 See Comparison
NZ_CP091069.1 See Comparison
NZ_CP087664.1 See Comparison
NZ_CP087658.1 See Comparison
NZ_CP087652.1 See Comparison
NZ_CP090206.1 See Comparison
NZ_CP127154.1 See Comparison
NZ_CP078124.1 See Comparison
CP139238.1 See Comparison
CP139220.1 See Comparison
NZ_CP154394.1 See Comparison
NZ_CP125344.1 See Comparison
NZ_CP152444.1 See Comparison
NZ_CP107292.1 See Comparison
NZ_CP064224.1 See Comparison
NZ_CP107298.1 See Comparison
NZ_CP047193.1 See Comparison
NZ_CP032241.1 See Comparison
NZ_CP063760.1 See Comparison
NZ_CP116492.1 See Comparison
NZ_CP087658.1 See Comparison
NZ_OM791346.1 See Comparison
NZ_CP103316.1 See Comparison
NZ_CP102187.1 See Comparison
NZ_MZ546617.1 See Comparison
NZ_CP072558.1 See Comparison
NZ_CP087652.1 See Comparison
NZ_CP087664.1 See Comparison
NZ_CP125344.1 See Comparison
NZ_CP091069.1 See Comparison
NZ_CP090206.1 See Comparison
NZ_CP127154.1 See Comparison
NZ_CP078124.1 See Comparison
CP139238.1 See Comparison
CP139220.1 See Comparison
NZ_CP107298.1 See Comparison
NZ_CP047193.1 See Comparison
NZ_CP032241.1 See Comparison
NZ_CP063760.1 See Comparison
NZ_CP154394.1 See Comparison
NZ_CP152444.1 See Comparison
NZ_CP064224.1 See Comparison
NZ_CP116492.1 See Comparison
NZ_CP102187.1 See Comparison
NZ_CP103316.1 See Comparison
NZ_CP107292.1 See Comparison
NZ_OM791346.1 See Comparison
NZ_MZ546617.1 See Comparison
NZ_CP087664.1 See Comparison
NZ_CP072558.1 See Comparison
NZ_CP087658.1 See Comparison
NZ_CP087652.1 See Comparison
NZ_CP078124.1 See Comparison
NZ_CP090206.1 See Comparison
NZ_CP091069.1 See Comparison
CP139238.1 See Comparison
CP139220.1 See Comparison
NZ_CP127154.1 See Comparison
NZ_CP154394.1 See Comparison
NZ_CP125344.1 See Comparison
NZ_CP152444.1 See Comparison
NZ_CP107298.1 See Comparison
NZ_CP047193.1 See Comparison
NZ_CP032241.1 See Comparison
NZ_CP063760.1 See Comparison
NZ_CP116492.1 See Comparison
NZ_CP064224.1 See Comparison
NZ_MZ546617.1 See Comparison
NZ_CP107292.1 See Comparison
NZ_OM791346.1 See Comparison
NZ_CP103316.1 See Comparison
NZ_CP102187.1 See Comparison
CP139238.1 See Comparison
NZ_CP072558.1 See Comparison
NZ_CP087664.1 See Comparison
NZ_CP087658.1 See Comparison
NZ_CP087652.1 See Comparison
NZ_CP091069.1 See Comparison
NZ_CP065555.1 See Comparison
NZ_CP090206.1 See Comparison
NZ_CP078124.1 See Comparison
CP139220.1 See Comparison
NZ_CP152444.1 See Comparison
NZ_CP127154.1 See Comparison
NZ_CP125344.1 See Comparison
NZ_CP154394.1 See Comparison
NZ_CP116492.1 See Comparison
NZ_CP047193.1 See Comparison
NZ_CP032241.1 See Comparison
NZ_CP064224.1 See Comparison
NZ_CP063760.1 See Comparison
NZ_CP090206.1 See Comparison
NZ_CP107292.1 See Comparison
NZ_CP103316.1 See Comparison
NZ_CP102187.1 See Comparison
NZ_MZ546617.1 See Comparison
NZ_CP087664.1 See Comparison
NZ_CP087658.1 See Comparison
NZ_CP091069.1 See Comparison
NZ_CP107298.1 See Comparison
NZ_OM791346.1 See Comparison
NZ_CP072558.1 See Comparison
NZ_CP087652.1 See Comparison
NZ_CP125344.1 See Comparison
NZ_CP078124.1 See Comparison
CP139238.1 See Comparison
CP139220.1 See Comparison
NZ_CP127154.1 See Comparison
NZ_CP154394.1 See Comparison
NZ_CP063760.1 See Comparison
NZ_CP152444.1 See Comparison
NZ_CP047193.1 See Comparison
NZ_CP032241.1 See Comparison
NZ_CP116492.1 See Comparison
NZ_CP064224.1 See Comparison
NZ_CP103316.1 See Comparison
NZ_CP107292.1 See Comparison
NZ_OM791346.1 See Comparison
NZ_CP107298.1 See Comparison
NZ_CP091069.1 See Comparison
NZ_CP072558.1 See Comparison
NZ_CP087652.1 See Comparison
NZ_CP102187.1 See Comparison
NZ_MZ546617.1 See Comparison
NZ_CP087664.1 See Comparison
NZ_CP087658.1 See Comparison
NZ_CP090206.1 See Comparison
NZ_CP078124.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Biosynthetic Gene Clusters

based on ANTISMASH

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2