Plasmid NZ_CP065462.1

Sequence

Nucleotide Information

Accession NZ_CP065462.1
Description Klebsiella pneumoniae strain Gordon plasmid pGordon_02
Source refseq
Topology linear
Length 195964 bp
GC Content 0.52 %
Created at NCBI Dec. 13, 2020



Assembly

Genome Data Information

Accession GCF_015992305.1
Assembly Coverage 73


Biosample

Curated Collection Information
Accession 16872506

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Taiwan
Original Query Type name
Coordinates (Lat/Lon) 23.60/120.84
Address Taiwan

ECOSYSTEM
Original Query Homo sapiens,Taichung Veterans General Hospital
Classification anthropogenic,hospital,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP103677.1 See Comparison
OW969754.1 See Comparison
OW969704.1 See Comparison
OW968284.1 See Comparison
OW848869.1 See Comparison
OW848817.1 See Comparison
OW849227.1 See Comparison
NZ_CP034282.1 See Comparison
NZ_CP141542.1 See Comparison
CP052148.1 See Comparison
CP052506.1 See Comparison
NZ_CP103677.1 See Comparison
NZ_CP066535.1 See Comparison
OW848869.1 See Comparison
OW969754.1 See Comparison
OW969704.1 See Comparison
OW968284.1 See Comparison
OW848817.1 See Comparison
OW849227.1 See Comparison
NZ_CP066535.1 See Comparison
NZ_CP034282.1 See Comparison
NZ_CP141542.1 See Comparison
CP052148.1 See Comparison
CP052506.1 See Comparison
NZ_CP103677.1 See Comparison
OW848817.1 See Comparison
OW848869.1 See Comparison
OW969754.1 See Comparison
OW969704.1 See Comparison
OW968284.1 See Comparison
OW849227.1 See Comparison
NZ_CP066535.1 See Comparison
NZ_CP141542.1 See Comparison
CP052148.1 See Comparison
CP052506.1 See Comparison
NZ_CP034282.1 See Comparison
OW968284.1 See Comparison
OW969754.1 See Comparison
OW969704.1 See Comparison
NZ_CP103677.1 See Comparison
OW848869.1 See Comparison
NZ_CP103677.1 See Comparison
OW848817.1 See Comparison
OW849227.1 See Comparison
NZ_CP141542.1 See Comparison
NZ_CP034282.1 See Comparison
CP052148.1 See Comparison
CP052506.1 See Comparison
NZ_CP066535.1 See Comparison
OW969754.1 See Comparison
OW969704.1 See Comparison
OW968284.1 See Comparison
OW848817.1 See Comparison
OW848869.1 See Comparison
NZ_CP141542.1 See Comparison
OW849227.1 See Comparison
NZ_CP034282.1 See Comparison
NZ_CP103677.1 See Comparison
NZ_CP065462.1 See Comparison
CP052148.1 See Comparison
CP052506.1 See Comparison
NZ_CP066535.1 See Comparison
OW848817.1 See Comparison
OW969704.1 See Comparison
OW848869.1 See Comparison
OW969754.1 See Comparison
OW968284.1 See Comparison
OW849227.1 See Comparison
CP052148.1 See Comparison
NZ_CP141542.1 See Comparison
NZ_CP034282.1 See Comparison
CP052506.1 See Comparison
NZ_CP066535.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore