Plasmid NZ_CP056429.1

Sequence

Nucleotide Information

Accession NZ_CP056429.1
Description Klebsiella pneumoniae strain RHBSTW-00515 plasmid pRHBSTW-00515_5, complete sequence
Source refseq
Topology circular
Length 5783 bp
GC Content 0.47 %
Created at NCBI Aug. 3, 2020



Assembly

Genome Data Information

Accession GCF_013735895.1
Assembly Coverage 92.2829


Biosample

Curated Collection Information
Accession 15148644

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query United Kingdom
Original Query Type name
Coordinates (Lat/Lon) 54.70/-3.28
Address United Kingdom

ECOSYSTEM
Original Query culture,Wastewater influent sample
Classification cell_culture,wastewater
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP024492.1 See Comparison
NZ_CP056387.1 See Comparison
NZ_CP056376.1 See Comparison
NZ_CP056429.1 See Comparison
NZ_CP056535.1 See Comparison
NZ_CP065166.1 See Comparison
NZ_CP055320.1 See Comparison
NZ_LR890418.1 See Comparison
NZ_LR890682.1 See Comparison
NZ_AP024178.1 See Comparison
NZ_CP083794.1 See Comparison
LR890403.1 See Comparison
NZ_CP056196.1 See Comparison
NZ_CP056387.1 See Comparison
NZ_CP024492.1 See Comparison
NZ_CP056376.1 See Comparison
NZ_CP056535.1 See Comparison
NZ_CP065166.1 See Comparison
NZ_CP055320.1 See Comparison
NZ_LR890418.1 See Comparison
NZ_LR890682.1 See Comparison
LR890403.1 See Comparison
NZ_AP024178.1 See Comparison
NZ_CP024492.1 See Comparison
NZ_CP056196.1 See Comparison
NZ_CP083794.1 See Comparison
NZ_CP065166.1 See Comparison
NZ_CP056387.1 See Comparison
NZ_CP056376.1 See Comparison
NZ_CP056535.1 See Comparison
NZ_LR890418.1 See Comparison
NZ_LR890682.1 See Comparison
NZ_CP055320.1 See Comparison
NZ_AP024178.1 See Comparison
NZ_CP055320.1 See Comparison
LR890403.1 See Comparison
NZ_CP056196.1 See Comparison
NZ_CP083794.1 See Comparison
NZ_CP024492.1 See Comparison
NZ_CP056387.1 See Comparison
NZ_CP056376.1 See Comparison
NZ_CP056535.1 See Comparison
NZ_CP083794.1 See Comparison
NZ_LR890418.1 See Comparison
NZ_LR890682.1 See Comparison
NZ_CP065166.1 See Comparison
LR890403.1 See Comparison
NZ_CP056196.1 See Comparison
NZ_AP024178.1 See Comparison
NZ_CP056387.1 See Comparison
NZ_CP056535.1 See Comparison
NZ_CP024492.1 See Comparison
NZ_CP056376.1 See Comparison
NZ_CP065166.1 See Comparison
NZ_CP055320.1 See Comparison
NZ_LR890418.1 See Comparison
NZ_LR890682.1 See Comparison
NZ_AP024178.1 See Comparison
NZ_CP056196.1 See Comparison
LR890403.1 See Comparison
NZ_LR890418.1 See Comparison
NZ_CP083794.1 See Comparison
NZ_CP024492.1 See Comparison
NZ_CP056387.1 See Comparison
NZ_CP056376.1 See Comparison
NZ_CP056535.1 See Comparison
NZ_CP055320.1 See Comparison
NZ_LR890682.1 See Comparison
NZ_AP024178.1 See Comparison
LR890403.1 See Comparison
NZ_CP083794.1 See Comparison
NZ_CP065166.1 See Comparison
NZ_CP056196.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore