Plasmid NZ_CP054748.1

Sequence

Nucleotide Information

Accession	NZ_CP054748.1
Description	Klebsiella pneumoniae strain KP20194c4 plasmid pKP20194c4-p4, complete sequence
Source	refseq
Topology	circular
Length	11971 bp
GC Content	0.56 %
Created at NCBI	June 18, 2020

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Klebsiella pneumoniae (573)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Klebsiella (570)
Species	Klebsiella_pneumoniae (573)
Strain

Assembly

Genome Data Information

Accession	GCF_013349005.1
Assembly Coverage	200

Biosample

Curated Collection Information

Accession	15186443

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	27.72N;112E
Original Query Type	coordinates
Coordinates (Lat/Lon)	27.72/112.00
Address	新科街, Leping Subdistrict, Louxing District, Loudi, Hunan, 417000, China

ECOSYSTEM

Original Query	ventilator
Classification	anthropogenic
Host-associated Taxon

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_CP154392.1	See Comparison
NZ_CP147745.1	See Comparison
NZ_CP147835.1	See Comparison
NZ_CP147167.1	See Comparison
NZ_CP146195.1	See Comparison
NZ_CP143303.1	See Comparison
NZ_CP054766.1	See Comparison
NZ_MT090962.1	See Comparison
NZ_CP119175.1	See Comparison
NZ_CP116907.1	See Comparison
NZ_CP109977.1	See Comparison
NZ_CP088993.1	See Comparison
NZ_CP102840.1	See Comparison
NZ_CP087643.1	See Comparison
NZ_CP102189.1	See Comparison
NZ_CP066155.1	See Comparison
NZ_CP082769.1	See Comparison
NZ_MW598236.1	See Comparison
NZ_CP082757.1	See Comparison
NZ_CP082013.1	See Comparison
NZ_CP077775.1	See Comparison
NZ_MW598243.1	See Comparison
NZ_CP041377.1	See Comparison
CP139241.1	See Comparison
CP023932.1	See Comparison
CP139223.1	See Comparison
NZ_CP136851.1	See Comparison
NZ_CP138519.1	See Comparison
NZ_CP136272.1	See Comparison
NZ_CP127157.1	See Comparison
NZ_CP130262.1	See Comparison
NZ_CP132046.1	See Comparison
NZ_CP154392.1	See Comparison
NZ_CP147835.1	See Comparison
NZ_CP147167.1	See Comparison
NZ_CP147745.1	See Comparison
NZ_CP054766.1	See Comparison
NZ_CP143303.1	See Comparison
NZ_CP146195.1	See Comparison
NZ_CP116907.1	See Comparison
NZ_MT090962.1	See Comparison
NZ_CP119175.1	See Comparison
NZ_CP102189.1	See Comparison
NZ_CP109977.1	See Comparison
NZ_CP102840.1	See Comparison
NZ_CP066155.1	See Comparison
NZ_CP087643.1	See Comparison
NZ_CP088993.1	See Comparison
NZ_MW598236.1	See Comparison
NZ_CP082757.1	See Comparison
NZ_CP082769.1	See Comparison
NZ_CP082013.1	See Comparison
NZ_CP077775.1	See Comparison
NZ_MW598243.1	See Comparison
NZ_CP041377.1	See Comparison
CP139241.1	See Comparison
CP023932.1	See Comparison
CP139223.1	See Comparison
NZ_CP136851.1	See Comparison
NZ_CP138519.1	See Comparison
NZ_CP136272.1	See Comparison
NZ_CP127157.1	See Comparison
NZ_CP130262.1	See Comparison
NZ_CP132046.1	See Comparison
NZ_CP154392.1	See Comparison
NZ_CP147835.1	See Comparison
NZ_CP147167.1	See Comparison
NZ_CP147745.1	See Comparison
NZ_CP146195.1	See Comparison
NZ_CP054766.1	See Comparison
NZ_CP143303.1	See Comparison
NZ_CP082757.1	See Comparison
NZ_CP119175.1	See Comparison
NZ_CP116907.1	See Comparison
NZ_CP109977.1	See Comparison
NZ_CP102189.1	See Comparison
NZ_CP066155.1	See Comparison
NZ_CP088993.1	See Comparison
NZ_MT090962.1	See Comparison
NZ_CP102840.1	See Comparison
NZ_CP087643.1	See Comparison
NZ_CP082769.1	See Comparison
NZ_CP082013.1	See Comparison
CP023932.1	See Comparison
NZ_CP077775.1	See Comparison
NZ_CP041377.1	See Comparison
NZ_MW598236.1	See Comparison
NZ_MW598243.1	See Comparison
NZ_CP138519.1	See Comparison
CP139241.1	See Comparison
NZ_CP130262.1	See Comparison
CP139223.1	See Comparison
NZ_CP136851.1	See Comparison
NZ_CP136272.1	See Comparison
NZ_CP132046.1	See Comparison
NZ_CP146195.1	See Comparison
NZ_CP147745.1	See Comparison
NZ_CP127157.1	See Comparison
NZ_CP154392.1	See Comparison
NZ_CP147167.1	See Comparison
NZ_CP054766.1	See Comparison
NZ_CP147835.1	See Comparison
NZ_CP143303.1	See Comparison
NZ_MT090962.1	See Comparison
NZ_CP119175.1	See Comparison
NZ_CP109977.1	See Comparison
NZ_CP116907.1	See Comparison
NZ_CP082757.1	See Comparison
NZ_CP102189.1	See Comparison
NZ_CP102840.1	See Comparison
NZ_CP087643.1	See Comparison
NZ_CP066155.1	See Comparison
NZ_CP088993.1	See Comparison
NZ_CP082769.1	See Comparison
NZ_CP041377.1	See Comparison
NZ_CP082013.1	See Comparison
NZ_CP077775.1	See Comparison
NZ_MW598236.1	See Comparison
NZ_MW598243.1	See Comparison
NZ_CP130262.1	See Comparison
CP139241.1	See Comparison
CP139223.1	See Comparison
NZ_CP136851.1	See Comparison
NZ_CP136272.1	See Comparison
NZ_CP132046.1	See Comparison
CP023932.1	See Comparison
NZ_CP138519.1	See Comparison
NZ_CP127157.1	See Comparison
NZ_CP154392.1	See Comparison
NZ_CP147745.1	See Comparison
NZ_CP147835.1	See Comparison
NZ_CP147167.1	See Comparison
NZ_CP143303.1	See Comparison
NZ_CP146195.1	See Comparison
NZ_CP054766.1	See Comparison
NZ_CP054748.1	See Comparison
NZ_CP119175.1	See Comparison
NZ_MT090962.1	See Comparison
NZ_CP116907.1	See Comparison
NZ_CP088993.1	See Comparison
NZ_CP109977.1	See Comparison
NZ_CP102189.1	See Comparison
NZ_CP066155.1	See Comparison
NZ_CP102840.1	See Comparison
NZ_CP087643.1	See Comparison
NZ_CP082757.1	See Comparison
NZ_CP082769.1	See Comparison
CP023932.1	See Comparison
NZ_CP082013.1	See Comparison
NZ_CP077775.1	See Comparison
NZ_MW598236.1	See Comparison
NZ_MW598243.1	See Comparison
NZ_CP041377.1	See Comparison
CP139241.1	See Comparison
CP139223.1	See Comparison
NZ_CP136272.1	See Comparison
NZ_CP136851.1	See Comparison
NZ_CP138519.1	See Comparison
NZ_CP127157.1	See Comparison
NZ_CP132046.1	See Comparison
NZ_CP130262.1	See Comparison
NZ_CP154392.1	See Comparison
NZ_CP146195.1	See Comparison
NZ_CP147745.1	See Comparison
NZ_CP147835.1	See Comparison
NZ_CP147167.1	See Comparison
NZ_CP102840.1	See Comparison
NZ_CP143303.1	See Comparison
NZ_CP054766.1	See Comparison
NZ_CP102189.1	See Comparison
NZ_MT090962.1	See Comparison
NZ_CP119175.1	See Comparison
NZ_CP116907.1	See Comparison
NZ_CP109977.1	See Comparison
NZ_CP088993.1	See Comparison
NZ_CP087643.1	See Comparison
NZ_CP066155.1	See Comparison
NZ_CP082757.1	See Comparison
NZ_CP082769.1	See Comparison
NZ_MW598236.1	See Comparison
NZ_CP077775.1	See Comparison
NZ_CP082013.1	See Comparison
NZ_MW598243.1	See Comparison
CP023932.1	See Comparison
NZ_CP041377.1	See Comparison
NZ_CP132046.1	See Comparison
NZ_CP136851.1	See Comparison
CP139241.1	See Comparison
CP139223.1	See Comparison
NZ_CP138519.1	See Comparison
NZ_CP136272.1	See Comparison
NZ_CP127157.1	See Comparison
NZ_CP130262.1	See Comparison
NZ_CP146195.1	See Comparison
NZ_CP147745.1	See Comparison
NZ_CP147835.1	See Comparison
NZ_CP147167.1	See Comparison
NZ_CP154392.1	See Comparison
NZ_CP102840.1	See Comparison
NZ_MT090962.1	See Comparison
NZ_CP119175.1	See Comparison
NZ_CP116907.1	See Comparison
NZ_CP109977.1	See Comparison
NZ_CP143303.1	See Comparison
NZ_CP054766.1	See Comparison
NZ_CP066155.1	See Comparison
NZ_CP102189.1	See Comparison
NZ_CP087643.1	See Comparison
NZ_CP082757.1	See Comparison
NZ_CP088993.1	See Comparison
NZ_CP082769.1	See Comparison
NZ_CP077775.1	See Comparison
NZ_CP082013.1	See Comparison
NZ_CP041377.1	See Comparison
NZ_MW598236.1	See Comparison
NZ_MW598243.1	See Comparison
CP139241.1	See Comparison
CP023932.1	See Comparison
CP139223.1	See Comparison
NZ_CP138519.1	See Comparison
NZ_CP127157.1	See Comparison
NZ_CP136851.1	See Comparison
NZ_CP136272.1	See Comparison
NZ_CP132046.1	See Comparison
NZ_CP130262.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Biosynthetic Gene Clusters

based on ANTISMASH

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore

Detected typing markers by plasmidfinder

NUCCORE ACC	Typing	Identity	Coverage	Start	End	Strand	HSP length	Template length	Position in ref	Positions in Contig	Note	Accession	Hit id	Organism L1	Organism L2
NUCCORE ACC	Typing	Identity	Coverage	Start	End	Strand	HSP length	Template length	Position in ref	Positions in Contig	Note	Accession	Hit id	Organism L1	Organism L2