Plasmid NZ_CP048653.1

Sequence

Nucleotide Information

Accession	NZ_CP048653.1
Description	Enterobacter roggenkampii strain Ecl_20_981 plasmid unnamed3, complete sequence
Source	refseq
Topology	circular
Length	4782 bp
GC Content	0.53 %
Created at NCBI	Sept. 14, 2020

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Enterobacter roggenkampii (1812935)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Enterobacter (547)
Species	Enterobacter_roggenkampii (1812935)
Strain

Assembly

Genome Data Information

Accession	GCF_014524505.1
Assembly Coverage	None

Biosample

Curated Collection Information

Accession	13881485

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	22.5N;114.2E
Original Query Type	coordinates
Coordinates (Lat/Lon)	22.50/114.20
Address	千溪走廊, North District, New Territories, Hong Kong, China

ECOSYSTEM

Original Query	Medical waste water
Classification	construction,hospital,wastewater
Host-associated Taxon

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_AP022457.1	See Comparison
NZ_CP065694.1	See Comparison
NZ_CP056725.1	See Comparison
NZ_CP056755.1	See Comparison
NZ_CP056746.1	See Comparison
NZ_CP056758.1	See Comparison
NZ_CP056749.1	See Comparison
NZ_OV754002.1	See Comparison
NZ_OV753638.1	See Comparison
NZ_CP102926.1	See Comparison
NZ_OW849159.1	See Comparison
OW968472.1	See Comparison
OW968362.1	See Comparison
OW968030.1	See Comparison
OW849363.1	See Comparison
OW849176.1	See Comparison
OW849165.1	See Comparison
OW849145.1	See Comparison
OW849097.1	See Comparison
NZ_CP092045.1	See Comparison
NZ_CP095168.1	See Comparison
NZ_CP058200.1	See Comparison
NZ_CP084218.1	See Comparison
NZ_CP083615.1	See Comparison
NZ_CP135453.1	See Comparison
NZ_CP126791.1	See Comparison
CP056562.1	See Comparison
CP056444.1	See Comparison
NZ_OV753638.1	See Comparison
NZ_CP065694.1	See Comparison
NZ_CP056725.1	See Comparison
NZ_CP056755.1	See Comparison
NZ_CP056746.1	See Comparison
NZ_CP056758.1	See Comparison
NZ_AP022457.1	See Comparison
NZ_CP056749.1	See Comparison
NZ_CP095168.1	See Comparison
NZ_CP102926.1	See Comparison
OW968362.1	See Comparison
OW849363.1	See Comparison
OW849176.1	See Comparison
OW849165.1	See Comparison
OW849145.1	See Comparison
OW849097.1	See Comparison
NZ_OV754002.1	See Comparison
NZ_OW849159.1	See Comparison
OW968472.1	See Comparison
OW968030.1	See Comparison
NZ_CP084218.1	See Comparison
NZ_CP092045.1	See Comparison
NZ_CP083615.1	See Comparison
NZ_CP135453.1	See Comparison
CP056562.1	See Comparison
NZ_CP058200.1	See Comparison
NZ_CP126791.1	See Comparison
CP056444.1	See Comparison
NZ_OV754002.1	See Comparison
NZ_CP056725.1	See Comparison
NZ_CP056755.1	See Comparison
NZ_CP056746.1	See Comparison
NZ_CP056758.1	See Comparison
NZ_CP056749.1	See Comparison
NZ_AP022457.1	See Comparison
NZ_CP065694.1	See Comparison
NZ_OV753638.1	See Comparison
NZ_OW849159.1	See Comparison
NZ_CP102926.1	See Comparison
NZ_CP095168.1	See Comparison
OW968362.1	See Comparison
OW849363.1	See Comparison
OW849176.1	See Comparison
OW849165.1	See Comparison
OW849145.1	See Comparison
OW849097.1	See Comparison
OW968472.1	See Comparison
OW968030.1	See Comparison
NZ_CP092045.1	See Comparison
NZ_CP135453.1	See Comparison
NZ_CP084218.1	See Comparison
NZ_CP083615.1	See Comparison
NZ_CP126791.1	See Comparison
CP056562.1	See Comparison
NZ_CP058200.1	See Comparison
CP056444.1	See Comparison
NZ_AP022457.1	See Comparison
NZ_OV754002.1	See Comparison
NZ_CP065694.1	See Comparison
NZ_CP056725.1	See Comparison
NZ_CP056755.1	See Comparison
NZ_CP056746.1	See Comparison
NZ_CP056758.1	See Comparison
NZ_CP056749.1	See Comparison
NZ_OV753638.1	See Comparison
NZ_OW849159.1	See Comparison
NZ_CP102926.1	See Comparison
OW968362.1	See Comparison
OW968472.1	See Comparison
OW849363.1	See Comparison
OW968030.1	See Comparison
OW849176.1	See Comparison
OW849165.1	See Comparison
OW849145.1	See Comparison
OW849097.1	See Comparison
NZ_CP092045.1	See Comparison
NZ_CP095168.1	See Comparison
NZ_CP084218.1	See Comparison
NZ_CP083615.1	See Comparison
NZ_CP065694.1	See Comparison
NZ_CP135453.1	See Comparison
CP056562.1	See Comparison
CP056444.1	See Comparison
NZ_AP022457.1	See Comparison
NZ_CP126791.1	See Comparison
NZ_CP058200.1	See Comparison
NZ_OV754002.1	See Comparison
NZ_CP048653.1	See Comparison
NZ_CP056725.1	See Comparison
NZ_CP056755.1	See Comparison
NZ_CP056746.1	See Comparison
NZ_CP056758.1	See Comparison
NZ_OV753638.1	See Comparison
NZ_CP056749.1	See Comparison
NZ_CP102926.1	See Comparison
NZ_OW849159.1	See Comparison
OW849363.1	See Comparison
OW968472.1	See Comparison
OW968030.1	See Comparison
OW968362.1	See Comparison
OW849176.1	See Comparison
OW849165.1	See Comparison
OW849145.1	See Comparison
OW849097.1	See Comparison
NZ_CP084218.1	See Comparison
NZ_CP095168.1	See Comparison
NZ_CP092045.1	See Comparison
NZ_CP083615.1	See Comparison
NZ_CP058200.1	See Comparison
NZ_CP126791.1	See Comparison
NZ_CP135453.1	See Comparison
NZ_CP056725.1	See Comparison
CP056562.1	See Comparison
CP056444.1	See Comparison
NZ_CP065694.1	See Comparison
NZ_AP022457.1	See Comparison
NZ_CP056755.1	See Comparison
NZ_CP056746.1	See Comparison
NZ_CP056758.1	See Comparison
NZ_CP056749.1	See Comparison
NZ_OW849159.1	See Comparison
NZ_CP102926.1	See Comparison
NZ_OV754002.1	See Comparison
NZ_OV753638.1	See Comparison
OW849363.1	See Comparison
OW968472.1	See Comparison
OW968030.1	See Comparison
OW968362.1	See Comparison
OW849145.1	See Comparison
OW849097.1	See Comparison
OW849176.1	See Comparison
NZ_CP092045.1	See Comparison
OW849165.1	See Comparison
NZ_CP095168.1	See Comparison
NZ_CP058200.1	See Comparison
NZ_CP084218.1	See Comparison
NZ_CP083615.1	See Comparison
NZ_CP135453.1	See Comparison
NZ_CP126791.1	See Comparison
CP056562.1	See Comparison
CP056444.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore