Plasmid NZ_CP030314.1

Sequence

Nucleotide Information

Accession NZ_CP030314.1
Description Klebsiella pneumoniae strain 11311 plasmid p11311-1, complete sequence
Source refseq
Topology circular
Length 203044 bp
GC Content 0.50 %
Created at NCBI May 22, 2021



Assembly

Genome Data Information

Accession GCF_009931055.1
Assembly Coverage 124


Biosample

Curated Collection Information
Accession 9499694

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 39.90N;116.40E
Original Query Type coordinates
Coordinates (Lat/Lon) 39.90/116.40
Address China Post, Zhengyi Avenue, Donghuamen, 首都功能核心区, Dongcheng District, Beijing, 100010, China

ECOSYSTEM
Original Query Homo sapiens,Physical
Classification host_associated
Host-associated Taxon
  • Homo sapiens (9606)
Host-associated Age 48
Host-associated Sex male

DISEASE
Original Query Mediastinal Abscess
DOID/SYMP

Visualization

PNG JSON



Similar Plasmids

based on Mash distance

NZ_CP144320.1 See Comparison
NZ_CP142988.1 See Comparison
NZ_MN058044.1 See Comparison
NZ_CP070899.1 See Comparison
NZ_CP083752.1 See Comparison
NZ_CP133876.1 See Comparison
NZ_CP089020.1 See Comparison
CP041024.1 See Comparison
NZ_CP082208.1 See Comparison
NZ_CP030321.1 See Comparison
CP128721.1 See Comparison
NZ_CP132616.1 See Comparison
NZ_CP142988.1 See Comparison
NZ_CP040352.1 See Comparison
NZ_CP129203.1 See Comparison
NZ_CP122579.1 See Comparison
NZ_CP122567.1 See Comparison
NZ_MN058044.1 See Comparison
NZ_CP144320.1 See Comparison
NZ_CP082208.1 See Comparison
NZ_CP083752.1 See Comparison
NZ_CP070899.1 See Comparison
NZ_CP030321.1 See Comparison
NZ_CP089020.1 See Comparison
CP041024.1 See Comparison
CP128721.1 See Comparison
NZ_CP133876.1 See Comparison
NZ_CP132616.1 See Comparison
NZ_CP040352.1 See Comparison
NZ_CP122579.1 See Comparison
NZ_CP129203.1 See Comparison
NZ_CP122567.1 See Comparison
NZ_CP083752.1 See Comparison
NZ_CP142988.1 See Comparison
NZ_CP070899.1 See Comparison
NZ_CP144320.1 See Comparison
NZ_MN058044.1 See Comparison
NZ_CP089020.1 See Comparison
NZ_CP082208.1 See Comparison
NZ_CP133876.1 See Comparison
NZ_CP030321.1 See Comparison
CP041024.1 See Comparison
NZ_CP132616.1 See Comparison
NZ_CP129203.1 See Comparison
CP128721.1 See Comparison
NZ_CP070899.1 See Comparison
NZ_CP040352.1 See Comparison
NZ_CP122579.1 See Comparison
NZ_CP122567.1 See Comparison
NZ_CP142988.1 See Comparison
NZ_CP144320.1 See Comparison
NZ_MN058044.1 See Comparison
NZ_CP082208.1 See Comparison
NZ_CP083752.1 See Comparison
NZ_CP030321.1 See Comparison
NZ_CP089020.1 See Comparison
CP041024.1 See Comparison
NZ_CP132616.1 See Comparison
NZ_CP133876.1 See Comparison
CP128721.1 See Comparison
NZ_CP129203.1 See Comparison
NZ_CP122579.1 See Comparison
NZ_CP040352.1 See Comparison
NZ_CP122567.1 See Comparison
NZ_CP070899.1 See Comparison
NZ_CP142988.1 See Comparison
NZ_CP144320.1 See Comparison
NZ_MN058044.1 See Comparison
NZ_CP082208.1 See Comparison
NZ_CP083752.1 See Comparison
NZ_CP089020.1 See Comparison
NZ_CP030314.1 See Comparison
NZ_CP030321.1 See Comparison
NZ_CP133876.1 See Comparison
CP041024.1 See Comparison
NZ_CP132616.1 See Comparison
NZ_CP040352.1 See Comparison
NZ_CP129203.1 See Comparison
CP128721.1 See Comparison
NZ_CP082208.1 See Comparison
NZ_CP142988.1 See Comparison
NZ_CP070899.1 See Comparison
NZ_CP083752.1 See Comparison
NZ_CP122579.1 See Comparison
NZ_CP122567.1 See Comparison
NZ_CP144320.1 See Comparison
NZ_MN058044.1 See Comparison
NZ_CP089020.1 See Comparison
NZ_CP122579.1 See Comparison
CP128721.1 See Comparison
NZ_CP040352.1 See Comparison
NZ_CP030321.1 See Comparison
CP041024.1 See Comparison
NZ_CP133876.1 See Comparison
NZ_CP132616.1 See Comparison
NZ_CP129203.1 See Comparison
NZ_CP122567.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Biosynthetic Gene Clusters

based on ANTISMASH

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore