Plasmid NZ_CP029120.1

Sequence

Nucleotide Information

Accession	NZ_CP029120.1
Description	Escherichia coli strain AR435 plasmid unnamed7
Source	refseq
Topology	linear
Length	6172 bp
GC Content	0.53 %
Created at NCBI	May 2, 2018

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Escherichia coli (562)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Escherichia (561)
Species	Escherichia_coli (562)
Strain

Assembly

Genome Data Information

Accession	GCF_003073835.1
Assembly Coverage	14.36

Biosample

Curated Collection Information

Accession	7291528

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	None
Original Query Type	None
Coordinates (Lat/Lon)
Address	None

ECOSYSTEM

Original Query	None
Classification	None
Host-associated Taxon

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

Similar Plasmids

based on Mash distance

NZ_CP038297.1	See Comparison
CP052406.1	See Comparison
CP052448.1	See Comparison
CP052319.1	See Comparison
NZ_CP048313.1	See Comparison
NZ_LT985314.1	See Comparison
NZ_LT985316.1	See Comparison
NZ_CP069546.1	See Comparison
NZ_OP378615.1	See Comparison
NZ_CP116991.1	See Comparison
NZ_CP117051.1	See Comparison
NZ_CP117047.1	See Comparison
NZ_CP116190.1	See Comparison
NZ_CP116097.1	See Comparison
CP114349.1	See Comparison
NZ_CP103518.1	See Comparison
NZ_CP103749.1	See Comparison
NZ_CP103648.1	See Comparison
NZ_CP103542.1	See Comparison
NZ_CP073965.1	See Comparison
AP026492.1	See Comparison
NZ_CP101297.1	See Comparison
NZ_MW133277.1	See Comparison
NZ_MW133276.1	See Comparison
NZ_MW133275.1	See Comparison
NZ_CP092977.1	See Comparison
NZ_CP060943.1	See Comparison
NZ_CP060991.1	See Comparison
NZ_CP060896.1	See Comparison
NZ_CP091694.1	See Comparison
NZ_CP074125.1	See Comparison
CP083491.1	See Comparison
NZ_CP068045.1	See Comparison
NZ_CP054162.1	See Comparison
NZ_CP059123.1	See Comparison
NZ_CP059128.1	See Comparison
NZ_CP079633.1	See Comparison
NZ_CP079628.1	See Comparison
NZ_CP067253.1	See Comparison
NZ_CP006639.1	See Comparison
NC_009789.1	See Comparison
NC_019060.1	See Comparison
NC_019040.1	See Comparison
NC_017658.1	See Comparison
NC_008597.1	See Comparison
NZ_CP026572.2	See Comparison
NC_011795.1	See Comparison
NC_011602.1	See Comparison
NZ_CP142947.1	See Comparison
NC_005324.1	See Comparison
CP137938.1	See Comparison
NZ_CP135695.1	See Comparison
NZ_OR237798.1	See Comparison
NZ_CP107130.1	See Comparison
NZ_CP128944.1	See Comparison
CP125063.1	See Comparison
CP125023.1	See Comparison
CP125017.1	See Comparison
CP125041.1	See Comparison
CP125046.1	See Comparison
CP124972.1	See Comparison
NZ_CP116998.1	See Comparison
NZ_AP027175.1	See Comparison
CP054338.1	See Comparison
CP056449.1	See Comparison
NZ_CP039841.1	See Comparison
NZ_OP378615.1	See Comparison
CP052319.1	See Comparison
NZ_CP048313.1	See Comparison
NZ_LT985314.1	See Comparison
NZ_LT985316.1	See Comparison
NZ_CP069546.1	See Comparison
NZ_KX291024.1	See Comparison
NZ_CP038297.1	See Comparison
CP052406.1	See Comparison
CP052448.1	See Comparison
CP114349.1	See Comparison
NZ_CP116991.1	See Comparison
NZ_CP117051.1	See Comparison
NZ_CP117047.1	See Comparison
NZ_CP116190.1	See Comparison
NZ_CP116097.1	See Comparison
NZ_CP103542.1	See Comparison
NZ_CP103518.1	See Comparison
NZ_CP103749.1	See Comparison
NZ_CP073965.1	See Comparison
NZ_CP103648.1	See Comparison
AP026492.1	See Comparison
NZ_MW133276.1	See Comparison
NZ_CP101297.1	See Comparison
NZ_MW133277.1	See Comparison
NZ_MW133275.1	See Comparison
NZ_CP068045.1	See Comparison
NZ_CP060943.1	See Comparison
NZ_CP060991.1	See Comparison
NZ_CP060896.1	See Comparison
NZ_CP054162.1	See Comparison
CP083491.1	See Comparison
NZ_CP092977.1	See Comparison
NZ_CP091694.1	See Comparison
NZ_CP059123.1	See Comparison
NZ_CP059128.1	See Comparison
NZ_CP079633.1	See Comparison
NZ_CP079628.1	See Comparison
NZ_CP006639.1	See Comparison
NZ_CP074125.1	See Comparison
NZ_CP067253.1	See Comparison
NC_011795.1	See Comparison
NC_009789.1	See Comparison
NC_008597.1	See Comparison
NC_019060.1	See Comparison
NC_019040.1	See Comparison
NC_017658.1	See Comparison
NC_011602.1	See Comparison
NZ_CP142947.1	See Comparison
CP137938.1	See Comparison
NZ_CP135695.1	See Comparison
NZ_CP107130.1	See Comparison
NZ_CP128944.1	See Comparison
CP125046.1	See Comparison
CP124972.1	See Comparison
NZ_CP026572.2	See Comparison
NC_005324.1	See Comparison
NZ_OR237798.1	See Comparison
CP125063.1	See Comparison
CP125023.1	See Comparison
CP125017.1	See Comparison
CP125041.1	See Comparison
NZ_CP116998.1	See Comparison
NZ_AP027175.1	See Comparison
CP056449.1	See Comparison
NZ_KX291024.1	See Comparison
NZ_CP039841.1	See Comparison
CP052406.1	See Comparison
NZ_CP038297.1	See Comparison
CP052448.1	See Comparison
CP052319.1	See Comparison
NZ_CP048313.1	See Comparison
NZ_LT985314.1	See Comparison
NZ_LT985316.1	See Comparison
NZ_CP059123.1	See Comparison
NZ_CP069546.1	See Comparison
NZ_CP116991.1	See Comparison
NZ_CP117051.1	See Comparison
NZ_CP117047.1	See Comparison
NZ_CP116190.1	See Comparison
NZ_CP116097.1	See Comparison
CP114349.1	See Comparison
NZ_CP103518.1	See Comparison
NZ_CP103749.1	See Comparison
NZ_CP103648.1	See Comparison
NZ_CP103542.1	See Comparison
NZ_CP073965.1	See Comparison
AP026492.1	See Comparison
NZ_CP101297.1	See Comparison
NZ_MW133277.1	See Comparison
NZ_MW133276.1	See Comparison
NZ_MW133275.1	See Comparison
NZ_CP060943.1	See Comparison
NZ_CP060991.1	See Comparison
NZ_CP060896.1	See Comparison
NZ_CP054162.1	See Comparison
CP083491.1	See Comparison
CP054338.1	See Comparison
NZ_OP378615.1	See Comparison
NZ_CP092977.1	See Comparison
NZ_CP091694.1	See Comparison
NZ_CP059128.1	See Comparison
NZ_CP079633.1	See Comparison
NZ_CP079628.1	See Comparison
NZ_CP074125.1	See Comparison
NZ_CP068045.1	See Comparison
NZ_CP067253.1	See Comparison
NZ_CP006639.1	See Comparison
NC_019060.1	See Comparison
NC_019040.1	See Comparison
NC_011795.1	See Comparison
NC_017658.1	See Comparison
NC_008597.1	See Comparison
NC_011602.1	See Comparison
NC_009789.1	See Comparison
NZ_OR237798.1	See Comparison
NZ_CP135695.1	See Comparison
NZ_CP026572.2	See Comparison
NC_005324.1	See Comparison
CP137938.1	See Comparison
CP125063.1	See Comparison
NZ_CP107130.1	See Comparison
NZ_CP128944.1	See Comparison
CP125023.1	See Comparison
CP125017.1	See Comparison
CP125041.1	See Comparison
NZ_AP027175.1	See Comparison
CP125046.1	See Comparison
CP124972.1	See Comparison
CP056449.1	See Comparison
NZ_CP142947.1	See Comparison
NZ_CP116998.1	See Comparison
NZ_CP048313.1	See Comparison
CP052406.1	See Comparison
CP052448.1	See Comparison
CP052319.1	See Comparison
NZ_CP039841.1	See Comparison
CP054338.1	See Comparison
NZ_KX291024.1	See Comparison
NZ_CP038297.1	See Comparison
NZ_LT985314.1	See Comparison
NZ_LT985316.1	See Comparison
CP114349.1	See Comparison
NZ_OP378615.1	See Comparison
NZ_CP116991.1	See Comparison
NZ_CP117051.1	See Comparison
NZ_CP117047.1	See Comparison
NZ_CP116097.1	See Comparison
NZ_CP069546.1	See Comparison
NZ_CP116190.1	See Comparison
NZ_CP103518.1	See Comparison
NZ_CP103749.1	See Comparison
NZ_CP103648.1	See Comparison
NZ_CP103542.1	See Comparison
NZ_CP101297.1	See Comparison
NZ_CP073965.1	See Comparison
NZ_MW133277.1	See Comparison
AP026492.1	See Comparison
NZ_CP060943.1	See Comparison
NZ_CP092977.1	See Comparison
NZ_CP091694.1	See Comparison
NZ_MW133276.1	See Comparison
NZ_MW133275.1	See Comparison
NZ_CP060991.1	See Comparison
NZ_CP060896.1	See Comparison
NZ_CP054162.1	See Comparison
NZ_CP067253.1	See Comparison
CP083491.1	See Comparison
NZ_CP059123.1	See Comparison
NZ_CP059128.1	See Comparison
NZ_CP079633.1	See Comparison
NZ_CP079628.1	See Comparison
NZ_CP068045.1	See Comparison
NZ_CP074125.1	See Comparison
NC_017658.1	See Comparison
NZ_CP006639.1	See Comparison
NC_019060.1	See Comparison
NC_019040.1	See Comparison
NC_008597.1	See Comparison
NC_011795.1	See Comparison
NC_011602.1	See Comparison
NC_009789.1	See Comparison
CP137938.1	See Comparison
NZ_CP026572.2	See Comparison
NC_005324.1	See Comparison
NZ_CP135695.1	See Comparison
NZ_CP107130.1	See Comparison
NZ_OR237798.1	See Comparison
NZ_AP027175.1	See Comparison
CP125063.1	See Comparison
CP125023.1	See Comparison
CP125017.1	See Comparison
NZ_CP128944.1	See Comparison
CP056449.1	See Comparison
NZ_CP116998.1	See Comparison
NZ_CP142947.1	See Comparison
CP125041.1	See Comparison
CP125046.1	See Comparison
CP124972.1	See Comparison
NZ_KX291024.1	See Comparison
NZ_CP039841.1	See Comparison
CP054338.1	See Comparison
CP052406.1	See Comparison
NZ_CP038297.1	See Comparison
CP052448.1	See Comparison
CP052319.1	See Comparison
NZ_CP048313.1	See Comparison
NZ_LT985314.1	See Comparison
NZ_LT985316.1	See Comparison
NZ_CP116991.1	See Comparison
NZ_CP069546.1	See Comparison
NZ_OP378615.1	See Comparison
NZ_CP117051.1	See Comparison
NZ_CP117047.1	See Comparison
NZ_CP116097.1	See Comparison
NZ_CP103518.1	See Comparison
NZ_CP116190.1	See Comparison
CP114349.1	See Comparison
NZ_CP103749.1	See Comparison
NZ_CP103648.1	See Comparison
NZ_CP103542.1	See Comparison
NZ_CP101297.1	See Comparison
NZ_CP073965.1	See Comparison
AP026492.1	See Comparison
NZ_MW133277.1	See Comparison
NZ_MW133276.1	See Comparison
NZ_MW133275.1	See Comparison
NZ_CP092977.1	See Comparison
NZ_CP060943.1	See Comparison
NZ_CP060991.1	See Comparison
NZ_CP060896.1	See Comparison
NZ_CP091694.1	See Comparison
NZ_CP054162.1	See Comparison
NZ_CP074125.1	See Comparison
NZ_CP059128.1	See Comparison
NZ_CP079633.1	See Comparison
NZ_CP079628.1	See Comparison
CP083491.1	See Comparison
NZ_CP059123.1	See Comparison
NZ_CP068045.1	See Comparison
NZ_CP067253.1	See Comparison
NC_017658.1	See Comparison
NC_019060.1	See Comparison
NC_019040.1	See Comparison
NZ_CP006639.1	See Comparison
CP137938.1	See Comparison
NC_011795.1	See Comparison
NC_011602.1	See Comparison
NC_009789.1	See Comparison
NC_008597.1	See Comparison
NZ_CP026572.2	See Comparison
NC_005324.1	See Comparison
NZ_CP107130.1	See Comparison
NZ_CP135695.1	See Comparison
NZ_OR237798.1	See Comparison
NZ_CP128944.1	See Comparison
CP125063.1	See Comparison
CP125023.1	See Comparison
CP125017.1	See Comparison
CP125041.1	See Comparison
CP125046.1	See Comparison
CP124972.1	See Comparison
CP056449.1	See Comparison
NZ_CP116998.1	See Comparison
NZ_AP027175.1	See Comparison
NZ_CP142947.1	See Comparison
NZ_OP378615.1	See Comparison
NZ_CP039841.1	See Comparison
CP054338.1	See Comparison
NZ_KX291024.1	See Comparison
NZ_CP038297.1	See Comparison
CP052406.1	See Comparison
CP052448.1	See Comparison
CP052319.1	See Comparison
NZ_CP048313.1	See Comparison
NZ_LT985314.1	See Comparison
NZ_LT985316.1	See Comparison
NZ_CP069546.1	See Comparison
NZ_CP116190.1	See Comparison
NZ_CP116991.1	See Comparison
NZ_CP117051.1	See Comparison
NZ_CP117047.1	See Comparison
NZ_CP116097.1	See Comparison
AP026492.1	See Comparison
CP114349.1	See Comparison
NZ_CP103518.1	See Comparison
NZ_CP103749.1	See Comparison
NZ_CP103648.1	See Comparison
NZ_CP103542.1	See Comparison
NZ_CP073965.1	See Comparison
NZ_MW133276.1	See Comparison
NZ_MW133277.1	See Comparison
NZ_CP101297.1	See Comparison
NZ_MW133275.1	See Comparison
NZ_CP092977.1	See Comparison
NZ_CP091694.1	See Comparison
NZ_CP060943.1	See Comparison
NZ_CP060991.1	See Comparison
NZ_CP060896.1	See Comparison
NZ_CP054162.1	See Comparison
CP083491.1	See Comparison
NZ_CP059123.1	See Comparison
NZ_CP059128.1	See Comparison
NZ_CP079633.1	See Comparison
NZ_CP079628.1	See Comparison
NZ_CP068045.1	See Comparison
NZ_CP074125.1	See Comparison
NZ_CP067253.1	See Comparison
NZ_CP006639.1	See Comparison
NC_019060.1	See Comparison
NC_019040.1	See Comparison
NC_011795.1	See Comparison
NC_017658.1	See Comparison
NC_011602.1	See Comparison
NZ_CP029120.1	See Comparison
NC_009789.1	See Comparison
NC_008597.1	See Comparison
NZ_CP026572.2	See Comparison
NC_005324.1	See Comparison
CP137938.1	See Comparison
NZ_OR237798.1	See Comparison
NZ_CP135695.1	See Comparison
CP125063.1	See Comparison
NZ_CP107130.1	See Comparison
NZ_CP128944.1	See Comparison
CP125023.1	See Comparison
CP125017.1	See Comparison
CP125041.1	See Comparison
CP125046.1	See Comparison
CP124972.1	See Comparison
NZ_CP116998.1	See Comparison
NZ_AP027175.1	See Comparison
NZ_CP142947.1	See Comparison
CP056449.1	See Comparison
NZ_CP039841.1	See Comparison
CP054338.1	See Comparison
NZ_KX291024.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)
NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore