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v. 2024_05_31_v2
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Antimicrobial Resistance Genes
Typing
Plasmid NZ_AP025924.1
Sequence
Nucleotide Information
Accession
NZ_AP025924.1
Description
Enterobacter hormaechei strain FUJ80380 plasmid pFJMB80380_1, complete sequence
Source
refseq
Topology
circular
Length
351318 bp
GC Content
0.47 %
Created at NCBI
June 18, 2022
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Enterobacter hormaechei (158836)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Enterobacter (547)
Species
Enterobacter_hormaechei (158836)
Strain
Assembly
Genome Data Information
Accession
GCF_023735975.1
Assembly Coverage
143
Biosample
Curated Collection Information
Accession
28888039
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
35.07N;137.00E
Original Query Type
coordinates
Coordinates (Lat/Lon)
35.07/137.00
Address
藤田医科大学病院, 大根若王子線, 二村台六丁目, Toyoake, Aichi Prefecture, Chubu Region, 458-0806, Japan
ECOSYSTEM
Original Query
Homo sapiens
Classification
host_associated
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
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Plasmids from same Biosample
NZ_AP025926.1
NZ_AP025925.1
Similar Plasmids
based on Mash distance
NZ_AP025884.1
See Comparison
NZ_AP025908.1
See Comparison
NZ_AP025888.1
See Comparison
NZ_AP025860.1
See Comparison
NZ_AP025916.1
See Comparison
NZ_AP025884.1
See Comparison
NZ_AP025908.1
See Comparison
NZ_AP025888.1
See Comparison
NZ_AP025860.1
See Comparison
NZ_AP025916.1
See Comparison
NZ_AP025884.1
See Comparison
NZ_AP025908.1
See Comparison
NZ_AP025924.1
See Comparison
NZ_AP025888.1
See Comparison
NZ_AP025860.1
See Comparison
NZ_AP025916.1
See Comparison
NZ_AP025884.1
See Comparison
NZ_AP025908.1
See Comparison
NZ_AP025888.1
See Comparison
NZ_AP025860.1
See Comparison
NZ_AP025916.1
See Comparison
NZ_AP025884.1
See Comparison
NZ_AP025908.1
See Comparison
NZ_AP025888.1
See Comparison
NZ_AP025860.1
See Comparison
NZ_AP025916.1
See Comparison
NZ_AP025884.1
See Comparison
NZ_AP025908.1
See Comparison
NZ_AP025888.1
See Comparison
NZ_AP025860.1
See Comparison
NZ_AP025916.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Antimicrobial Resistance
based on NCBIAMRFinder and CARD
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore