Plasmid NZ_AP025860.1

Sequence

Nucleotide Information

Accession NZ_AP025860.1
Description Enterobacter hormaechei strain FUJ80145 plasmid pFJMB80145_1, complete sequence
Source refseq
Topology circular
Length 366190 bp
GC Content 0.47 %
Created at NCBI June 18, 2022



Assembly

Genome Data Information

Accession GCF_023735535.1
Assembly Coverage 158


Biosample

Curated Collection Information
Accession 28888022

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 35.07N;137.00E
Original Query Type coordinates
Coordinates (Lat/Lon) 35.07/137.00
Address 藤田医科大学病院, 大根若王子線, 二村台六丁目, Toyoake, Aichi Prefecture, Chubu Region, 458-0806, Japan

ECOSYSTEM
Original Query Homo sapiens
Classification host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_AP025856.1 See Comparison
NZ_AP025920.1 See Comparison
NZ_AP025880.1 See Comparison
NZ_AP025900.1 See Comparison
NZ_AP025864.1 See Comparison
NZ_AP025912.1 See Comparison
NZ_AP025928.1 See Comparison
NZ_AP025884.1 See Comparison
NZ_AP025908.1 See Comparison
NZ_AP025924.1 See Comparison
NZ_AP025888.1 See Comparison
NZ_AP025916.1 See Comparison
NZ_AP025876.1 See Comparison
NZ_AP025856.1 See Comparison
NZ_AP025856.1 See Comparison
NZ_AP025920.1 See Comparison
NZ_AP025880.1 See Comparison
NZ_AP025900.1 See Comparison
NZ_AP025864.1 See Comparison
NZ_AP025912.1 See Comparison
NZ_AP025928.1 See Comparison
NZ_AP025884.1 See Comparison
NZ_AP025908.1 See Comparison
NZ_AP025924.1 See Comparison
NZ_AP025888.1 See Comparison
NZ_AP025916.1 See Comparison
NZ_AP025876.1 See Comparison
NZ_AP025856.1 See Comparison
NZ_AP025920.1 See Comparison
NZ_AP025880.1 See Comparison
NZ_AP025900.1 See Comparison
NZ_AP025864.1 See Comparison
NZ_AP025912.1 See Comparison
NZ_AP025928.1 See Comparison
NZ_AP025884.1 See Comparison
NZ_AP025908.1 See Comparison
NZ_AP025924.1 See Comparison
NZ_AP025888.1 See Comparison
NZ_AP025860.1 See Comparison
NZ_AP025916.1 See Comparison
NZ_AP025876.1 See Comparison
NZ_AP025856.1 See Comparison
NZ_AP025920.1 See Comparison
NZ_AP025880.1 See Comparison
NZ_AP025900.1 See Comparison
NZ_AP025864.1 See Comparison
NZ_AP025912.1 See Comparison
NZ_AP025928.1 See Comparison
NZ_AP025884.1 See Comparison
NZ_AP025908.1 See Comparison
NZ_AP025924.1 See Comparison
NZ_AP025888.1 See Comparison
NZ_AP025916.1 See Comparison
NZ_AP025876.1 See Comparison
NZ_AP025920.1 See Comparison
NZ_AP025880.1 See Comparison
NZ_AP025900.1 See Comparison
NZ_AP025864.1 See Comparison
NZ_AP025912.1 See Comparison
NZ_AP025928.1 See Comparison
NZ_AP025884.1 See Comparison
NZ_AP025908.1 See Comparison
NZ_AP025924.1 See Comparison
NZ_AP025888.1 See Comparison
NZ_AP025916.1 See Comparison
NZ_AP025876.1 See Comparison
NZ_AP025856.1 See Comparison
NZ_AP025920.1 See Comparison
NZ_AP025880.1 See Comparison
NZ_AP025900.1 See Comparison
NZ_AP025864.1 See Comparison
NZ_AP025912.1 See Comparison
NZ_AP025928.1 See Comparison
NZ_AP025884.1 See Comparison
NZ_AP025908.1 See Comparison
NZ_AP025924.1 See Comparison
NZ_AP025888.1 See Comparison
NZ_AP025916.1 See Comparison
NZ_AP025876.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore