Plasmid NZ_AP018142.1

Sequence

Nucleotide Information

Accession NZ_AP018142.1
Description Escherichia coli strain M213 isolate M213 plasmid pM213_X3, complete sequence
Source refseq
Topology circular
Length 43534 bp
GC Content 0.47 %
Created at NCBI April 18, 2020



Biosample

Curated Collection Information
Accession 6684306

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 16.7788N;96.1490E
Original Query Type coordinates
Coordinates (Lat/Lon) 16.78/96.15
Address Yangon General Hospital Emergency, Lanmadaw Road, Chinatown, Western District, Latha, Yangon West, Yangon, 11141, Myanmar

ECOSYSTEM
Original Query Homo sapiens
Classification host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON



Similar Plasmids

based on Mash distance

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NZ_CP137857.1 See Comparison
NZ_CP141747.1 See Comparison
NZ_CP156720.1 See Comparison
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NZ_MH286950.1 See Comparison
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NZ_MK450348.1 See Comparison
NZ_MK450347.1 See Comparison
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NZ_KP776609.1 See Comparison
NZ_MH286951.1 See Comparison
NZ_MH286949.1 See Comparison
NZ_MF547511.1 See Comparison
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MK715437.1 See Comparison
NZ_AP018141.1 See Comparison
NZ_ON209135.1 See Comparison
NZ_LC218099.1 See Comparison
NZ_CP117992.1 See Comparison
CP071169.1 See Comparison
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NZ_CP102900.1 See Comparison
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NZ_CP102875.1 See Comparison
NZ_CP102905.1 See Comparison
NZ_CP095675.1 See Comparison
NZ_MZ363820.1 See Comparison
NZ_CP048392.1 See Comparison
NZ_CP081819.1 See Comparison
NZ_CP095668.1 See Comparison
NZ_MT621565.1 See Comparison
NZ_MT621566.1 See Comparison
NZ_MT621564.1 See Comparison
NZ_MW415443.1 See Comparison
NZ_CP091474.2 See Comparison
NZ_CP092650.1 See Comparison
NZ_MW415444.1 See Comparison
NZ_MW242344.1 See Comparison
NZ_CP028536.2 See Comparison
NZ_CP054412.1 See Comparison
NZ_CP073363.1 See Comparison
NZ_CP054273.1 See Comparison
NZ_CP141747.1 See Comparison
LC807801.1 See Comparison
LC807797.1 See Comparison
NZ_CP137857.1 See Comparison
NZ_CP156720.1 See Comparison
NZ_CP139407.1 See Comparison
NZ_MK450348.1 See Comparison
NZ_MK450349.1 See Comparison
NZ_MK372391.1 See Comparison
NZ_MH286950.1 See Comparison
NZ_MK450347.1 See Comparison
NZ_MK372393.1 See Comparison
NZ_MH286951.1 See Comparison
NZ_MH286952.1 See Comparison
NZ_MH286949.1 See Comparison
NZ_MH234502.1 See Comparison
NZ_MF547511.1 See Comparison
NZ_KP776609.1 See Comparison
NZ_AP018141.1 See Comparison
CP071169.1 See Comparison
MK715437.1 See Comparison
NZ_LC218099.1 See Comparison
NZ_ON209135.1 See Comparison
NZ_CP117992.1 See Comparison
NZ_CP102905.1 See Comparison
NZ_ON023484.1 See Comparison
NZ_CP096179.1 See Comparison
NZ_CP102900.1 See Comparison
NZ_CP102875.1 See Comparison
NZ_CP101273.1 See Comparison
NZ_MZ363820.1 See Comparison
NZ_CP048392.1 See Comparison
NZ_CP091474.2 See Comparison
NZ_CP081819.1 See Comparison
NZ_MT621565.1 See Comparison
NZ_MW415443.1 See Comparison
NZ_MT621566.1 See Comparison
NZ_MT621564.1 See Comparison
NZ_CP092650.1 See Comparison
NZ_CP054273.1 See Comparison
NZ_MW415444.1 See Comparison
NZ_MW242344.1 See Comparison
NZ_CP073363.1 See Comparison
NZ_CP054412.1 See Comparison
NZ_CP028536.2 See Comparison
NZ_CP095675.1 See Comparison
NZ_CP095668.1 See Comparison
NZ_CP156720.1 See Comparison
NZ_CP137857.1 See Comparison
NZ_CP139407.1 See Comparison
LC807801.1 See Comparison
LC807797.1 See Comparison
NZ_CP141747.1 See Comparison
NZ_MH286950.1 See Comparison
NZ_MK450349.1 See Comparison
NZ_MH286952.1 See Comparison
NZ_MK372391.1 See Comparison
NZ_MF547511.1 See Comparison
NZ_MH286951.1 See Comparison
NZ_MH286949.1 See Comparison
NZ_MK450348.1 See Comparison
NZ_MK450347.1 See Comparison
NZ_MK372393.1 See Comparison
NZ_MH234502.1 See Comparison
CP071169.1 See Comparison
NZ_KP776609.1 See Comparison
NZ_AP018141.1 See Comparison
MK715437.1 See Comparison
NZ_CP102905.1 See Comparison
NZ_LC218099.1 See Comparison
NZ_CP117992.1 See Comparison
NZ_ON209135.1 See Comparison
NZ_ON023484.1 See Comparison
NZ_CP048392.1 See Comparison
NZ_CP101273.1 See Comparison
NZ_CP102900.1 See Comparison
NZ_CP102875.1 See Comparison
NZ_CP096179.1 See Comparison
NZ_MZ363820.1 See Comparison
NZ_CP091474.2 See Comparison
NZ_CP081819.1 See Comparison
NZ_CP095675.1 See Comparison
NZ_CP095668.1 See Comparison
NZ_CP092650.1 See Comparison
NZ_MT621565.1 See Comparison
NZ_MT621566.1 See Comparison
NZ_MT621564.1 See Comparison
LC807801.1 See Comparison
NZ_CP054273.1 See Comparison
NZ_MW242344.1 See Comparison
NZ_CP054412.1 See Comparison
NZ_CP156720.1 See Comparison
NZ_MW415443.1 See Comparison
NZ_MW415444.1 See Comparison
NZ_CP073363.1 See Comparison
NZ_CP028536.2 See Comparison
NZ_CP137857.1 See Comparison
LC807797.1 See Comparison
NZ_CP141747.1 See Comparison
NZ_MK450349.1 See Comparison
NZ_CP139407.1 See Comparison
NZ_MK372391.1 See Comparison
NZ_MH286950.1 See Comparison
NZ_MH286952.1 See Comparison
NZ_MK450348.1 See Comparison
NZ_MK450347.1 See Comparison
NZ_MK372393.1 See Comparison
NZ_MH234502.1 See Comparison
NZ_MH286949.1 See Comparison
NZ_MH286951.1 See Comparison
NZ_MF547511.1 See Comparison
NZ_CP048392.1 See Comparison
NZ_KP776609.1 See Comparison
NZ_AP018141.1 See Comparison
MK715437.1 See Comparison
NZ_LC218099.1 See Comparison
NZ_ON023484.1 See Comparison
NZ_CP101273.1 See Comparison
CP071169.1 See Comparison
NZ_CP117992.1 See Comparison
NZ_ON209135.1 See Comparison
NZ_CP102900.1 See Comparison
NZ_CP102875.1 See Comparison
NZ_CP102905.1 See Comparison
NZ_CP096179.1 See Comparison
NZ_MZ363820.1 See Comparison
NZ_CP095675.1 See Comparison
NZ_CP081819.1 See Comparison
NZ_CP095668.1 See Comparison
NZ_MT621565.1 See Comparison
NZ_MT621566.1 See Comparison
NZ_CP091474.2 See Comparison
NZ_MT621564.1 See Comparison
NZ_CP054273.1 See Comparison
NZ_CP092650.1 See Comparison
NZ_MW242344.1 See Comparison
NZ_MW415443.1 See Comparison
NZ_MW415444.1 See Comparison
NZ_CP054412.1 See Comparison
NZ_CP156720.1 See Comparison
NZ_CP073363.1 See Comparison
NZ_CP028536.2 See Comparison
NZ_CP137857.1 See Comparison
NZ_CP139407.1 See Comparison
LC807801.1 See Comparison
LC807797.1 See Comparison
NZ_CP141747.1 See Comparison
NZ_MH286952.1 See Comparison
NZ_MK372391.1 See Comparison
NZ_MH286950.1 See Comparison
NZ_MK450348.1 See Comparison
NZ_MK450347.1 See Comparison
NZ_MK372393.1 See Comparison
NZ_MK450349.1 See Comparison
NZ_MH286951.1 See Comparison
NZ_MH286949.1 See Comparison
NZ_MF547511.1 See Comparison
NZ_MH234502.1 See Comparison
NZ_KP776609.1 See Comparison
NZ_AP018141.1 See Comparison
MK715437.1 See Comparison
NZ_LC218099.1 See Comparison
CP071169.1 See Comparison
NZ_CP117992.1 See Comparison
NZ_CP102900.1 See Comparison
NZ_ON209135.1 See Comparison
NZ_ON023484.1 See Comparison
NZ_CP102875.1 See Comparison
NZ_CP102905.1 See Comparison
NZ_CP096179.1 See Comparison
NZ_MZ363820.1 See Comparison
NZ_CP101273.1 See Comparison
NZ_CP095675.1 See Comparison
NZ_CP048392.1 See Comparison
NZ_CP081819.1 See Comparison
NZ_CP095668.1 See Comparison
NZ_MT621565.1 See Comparison
NZ_CP091474.2 See Comparison
NZ_MT621566.1 See Comparison
NZ_MT621564.1 See Comparison
NZ_CP054273.1 See Comparison
NZ_CP092650.1 See Comparison
NZ_CP137857.1 See Comparison
NZ_MW242344.1 See Comparison
NZ_CP054412.1 See Comparison
NZ_CP028536.2 See Comparison
NZ_MW415443.1 See Comparison
NZ_MW415444.1 See Comparison
NZ_CP073363.1 See Comparison
NZ_MK450348.1 See Comparison
NZ_CP141747.1 See Comparison
NZ_CP139407.1 See Comparison
NZ_MH286950.1 See Comparison
NZ_CP156720.1 See Comparison
LC807801.1 See Comparison
LC807797.1 See Comparison
NZ_MK450349.1 See Comparison
NZ_MK372391.1 See Comparison
NZ_MK450347.1 See Comparison
NZ_MK372393.1 See Comparison
NZ_MH286952.1 See Comparison
NZ_MH286951.1 See Comparison
NZ_MH286949.1 See Comparison
NZ_MF547511.1 See Comparison
NZ_AP018141.1 See Comparison
NZ_KP776609.1 See Comparison
NZ_MH234502.1 See Comparison
NZ_AP018142.1 See Comparison
MK715437.1 See Comparison
NZ_CP117992.1 See Comparison
CP071169.1 See Comparison
NZ_LC218099.1 See Comparison
NZ_ON023484.1 See Comparison
NZ_ON209135.1 See Comparison
NZ_CP048392.1 See Comparison
NZ_CP102900.1 See Comparison
NZ_CP102875.1 See Comparison
NZ_CP102905.1 See Comparison
NZ_CP101273.1 See Comparison
NZ_CP096179.1 See Comparison
NZ_MZ363820.1 See Comparison
NZ_CP095668.1 See Comparison
NZ_CP081819.1 See Comparison
NZ_MT621565.1 See Comparison
NZ_MT621564.1 See Comparison
NZ_CP095675.1 See Comparison
NZ_MT621566.1 See Comparison
NZ_MW415443.1 See Comparison
NZ_CP054273.1 See Comparison
NZ_CP091474.2 See Comparison
NZ_CP092650.1 See Comparison
NZ_MW242344.1 See Comparison
NZ_MW415444.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore