Plasmid NC_016979.1

Sequence

Nucleotide Information

Accession NC_016979.1
Description Klebsiella pneumoniae plasmid pUUH239.1, complete sequence
Source refseq
Topology circular
Length 5247 bp
GC Content 0.49 %
Created at NCBI March 13, 2012



Biosample

Curated Collection Information
Accession 14224418

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query None
Original Query Type None
Coordinates (Lat/Lon)
Address None

ECOSYSTEM
Original Query None
Classification None
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON



Similar Plasmids

based on Mash distance

NZ_CP104801.1 See Comparison
NZ_CP102550.1 See Comparison
NZ_CP101882.1 See Comparison
NZ_CP079662.1 See Comparison
NZ_CP079696.1 See Comparison
NZ_CP079622.1 See Comparison
NZ_CP079177.1 See Comparison
NZ_CP079119.1 See Comparison
NZ_CP029592.1 See Comparison
NZ_CP024043.1 See Comparison
NZ_CP045021.1 See Comparison
NZ_CP029592.1 See Comparison
NZ_CP104801.1 See Comparison
NZ_CP101882.1 See Comparison
NZ_CP079119.1 See Comparison
NZ_CP102550.1 See Comparison
NZ_CP079662.1 See Comparison
NZ_CP079696.1 See Comparison
NZ_CP079622.1 See Comparison
NZ_CP079177.1 See Comparison
NZ_CP045021.1 See Comparison
NZ_CP024043.1 See Comparison
NZ_CP104801.1 See Comparison
NZ_CP102550.1 See Comparison
NZ_CP079177.1 See Comparison
NZ_CP101882.1 See Comparison
NZ_CP079119.1 See Comparison
NZ_CP029592.1 See Comparison
NC_016979.1 See Comparison
NZ_CP079662.1 See Comparison
NZ_CP079696.1 See Comparison
NZ_CP079622.1 See Comparison
NZ_CP045021.1 See Comparison
NZ_CP024043.1 See Comparison
NZ_CP104801.1 See Comparison
NZ_CP102550.1 See Comparison
NZ_CP101882.1 See Comparison
NZ_CP045021.1 See Comparison
NZ_CP079662.1 See Comparison
NZ_CP079696.1 See Comparison
NZ_CP079622.1 See Comparison
NZ_CP079177.1 See Comparison
NZ_CP079119.1 See Comparison
NZ_CP101882.1 See Comparison
NZ_CP024043.1 See Comparison
NZ_CP029592.1 See Comparison
NZ_CP104801.1 See Comparison
NZ_CP102550.1 See Comparison
NZ_CP079662.1 See Comparison
NZ_CP079696.1 See Comparison
NZ_CP079177.1 See Comparison
NZ_CP079622.1 See Comparison
NZ_CP079119.1 See Comparison
NZ_CP079177.1 See Comparison
NZ_CP024043.1 See Comparison
NZ_CP104801.1 See Comparison
NZ_CP102550.1 See Comparison
NZ_CP045021.1 See Comparison
NZ_CP029592.1 See Comparison
NZ_CP101882.1 See Comparison
NZ_CP079662.1 See Comparison
NZ_CP079696.1 See Comparison
NZ_CP079622.1 See Comparison
NZ_CP079119.1 See Comparison
NZ_CP029592.1 See Comparison
NZ_CP045021.1 See Comparison
NZ_CP024043.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore