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v. 2024_05_31_v2
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Typing
Plasmid CP093124.1
Sequence
Nucleotide Information
Accession
CP093124.1
Description
Salmonella enterica strain 2014AM-2067 plasmid p2014AM-1331_2, complete sequence
Source
insd
Topology
circular
Length
4633 bp
GC Content
0.50 %
Created at NCBI
March 15, 2022
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Salmonella enterica (28901)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Salmonella (590)
Species
Salmonella_enterica (28901)
Strain
Assembly
Genome Data Information
Accession
GCA_022569755.1
Assembly Coverage
192
Biosample
Curated Collection Information
Accession
5596277
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
USA
Original Query Type
name
Coordinates (Lat/Lon)
39.78/-100.45
Address
USA
ECOSYSTEM
Original Query
None
Classification
None
Host-associated Taxon
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
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Plasmids from same Biosample
CP093125.1
CP093123.1
Similar Plasmids
based on Mash distance
NZ_CP084219.1
See Comparison
CP082541.1
See Comparison
CP082744.1
See Comparison
CP016040.1
See Comparison
NZ_CP084219.1
See Comparison
NZ_CP124524.1
See Comparison
NZ_AP027660.1
See Comparison
NZ_AP027583.1
See Comparison
NZ_CP140419.1
See Comparison
NZ_CP069831.1
See Comparison
NZ_CP104364.1
See Comparison
NZ_CP104360.1
See Comparison
NZ_CP088144.1
See Comparison
CP093087.1
See Comparison
CP093075.1
See Comparison
CP093111.1
See Comparison
CP016040.1
See Comparison
CP082541.1
See Comparison
CP082744.1
See Comparison
NZ_CP124524.1
See Comparison
NZ_CP104364.1
See Comparison
NZ_AP027660.1
See Comparison
NZ_AP027583.1
See Comparison
NZ_CP140419.1
See Comparison
NZ_CP069831.1
See Comparison
NZ_CP104360.1
See Comparison
NZ_CP088144.1
See Comparison
CP093111.1
See Comparison
CP093087.1
See Comparison
CP093075.1
See Comparison
CP082541.1
See Comparison
NZ_CP084219.1
See Comparison
CP082744.1
See Comparison
NZ_AP027660.1
See Comparison
CP016040.1
See Comparison
NZ_AP027583.1
See Comparison
NZ_CP124524.1
See Comparison
NZ_CP069831.1
See Comparison
NZ_CP140419.1
See Comparison
CP093111.1
See Comparison
NZ_CP088144.1
See Comparison
CP093087.1
See Comparison
CP093075.1
See Comparison
NZ_CP104364.1
See Comparison
NZ_CP104360.1
See Comparison
CP082541.1
See Comparison
NZ_CP084219.1
See Comparison
CP082744.1
See Comparison
CP016040.1
See Comparison
NZ_CP124524.1
See Comparison
NZ_AP027583.1
See Comparison
NZ_CP104364.1
See Comparison
NZ_AP027660.1
See Comparison
NZ_CP140419.1
See Comparison
NZ_CP069831.1
See Comparison
NZ_CP104360.1
See Comparison
NZ_CP088144.1
See Comparison
CP082541.1
See Comparison
CP093087.1
See Comparison
CP093075.1
See Comparison
CP093111.1
See Comparison
NZ_CP084219.1
See Comparison
CP082744.1
See Comparison
CP016040.1
See Comparison
NZ_CP140419.1
See Comparison
NZ_CP124524.1
See Comparison
NZ_AP027660.1
See Comparison
NZ_AP027583.1
See Comparison
NZ_CP069831.1
See Comparison
CP093111.1
See Comparison
NZ_CP088144.1
See Comparison
CP093087.1
See Comparison
CP093075.1
See Comparison
NZ_CP104364.1
See Comparison
NZ_CP104360.1
See Comparison
CP082541.1
See Comparison
CP082744.1
See Comparison
NZ_CP084219.1
See Comparison
NZ_CP124524.1
See Comparison
CP016040.1
See Comparison
NZ_CP069831.1
See Comparison
NZ_AP027660.1
See Comparison
NZ_AP027583.1
See Comparison
NZ_CP140419.1
See Comparison
NZ_CP104364.1
See Comparison
NZ_CP104360.1
See Comparison
CP093087.1
See Comparison
NZ_CP088144.1
See Comparison
CP093075.1
See Comparison
CP093124.1
See Comparison
CP093111.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
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NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore