Plasmid AP031266.1

Sequence

Nucleotide Information

Accession AP031266.1
Description Enterococcus faecium NUITM-VRE19 plasmid pNUITMV19_10 DNA, complete sequence
Source insd
Topology circular
Length 2047 bp
GC Content 0.38 %
Created at NCBI March 8, 2024



Biosample

Curated Collection Information
Accession 37205365

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 20.99138062N;105.86277218E
Original Query Type coordinates
Coordinates (Lat/Lon) 20.99/105.86
Address Đường Tam Trinh, Phường Mai Động, Hoang Mai District, Hà Nội, 11617, Vietnam

ECOSYSTEM
Original Query None
Classification None
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

AP026640.1 See Comparison
NZ_CP065762.1 See Comparison
NZ_CP072585.1 See Comparison
NZ_CP072593.1 See Comparison
NZ_CP071968.1 See Comparison
NZ_CP044282.1 See Comparison
NZ_CP066398.1 See Comparison
NZ_LR135178.1 See Comparison
NZ_LR135442.1 See Comparison
NZ_LR135393.1 See Comparison
NZ_LR135178.1 See Comparison
NZ_CP044327.1 See Comparison
NZ_CP059754.1 See Comparison
NZ_CP059746.1 See Comparison
NZ_CP071968.1 See Comparison
NZ_CP059792.1 See Comparison
NZ_CP059815.1 See Comparison
NZ_CP059762.1 See Comparison
NZ_CP059822.1 See Comparison
AP026640.1 See Comparison
NZ_CP065762.1 See Comparison
NZ_CP072585.1 See Comparison
NZ_CP072593.1 See Comparison
NZ_CP044282.1 See Comparison
NZ_CP066398.1 See Comparison
NZ_LR135442.1 See Comparison
NZ_LR135393.1 See Comparison
NZ_CP065762.1 See Comparison
NZ_CP044327.1 See Comparison
NZ_CP059754.1 See Comparison
NZ_CP059746.1 See Comparison
AP026640.1 See Comparison
NZ_CP059792.1 See Comparison
NZ_CP059815.1 See Comparison
NZ_CP059762.1 See Comparison
NZ_CP059822.1 See Comparison
NZ_CP072585.1 See Comparison
NZ_CP072593.1 See Comparison
NZ_CP071968.1 See Comparison
AP026640.1 See Comparison
NZ_LR135442.1 See Comparison
NZ_LR135393.1 See Comparison
NZ_CP059792.1 See Comparison
NZ_CP059815.1 See Comparison
NZ_CP059762.1 See Comparison
NZ_CP059822.1 See Comparison
NZ_CP044282.1 See Comparison
NZ_LR135178.1 See Comparison
NZ_CP066398.1 See Comparison
NZ_CP044327.1 See Comparison
NZ_CP059754.1 See Comparison
NZ_CP059746.1 See Comparison
NZ_CP072585.1 See Comparison
NZ_CP065762.1 See Comparison
NZ_CP072593.1 See Comparison
NZ_CP044282.1 See Comparison
NZ_CP071968.1 See Comparison
NZ_LR135442.1 See Comparison
NZ_LR135393.1 See Comparison
NZ_LR135178.1 See Comparison
NZ_CP066398.1 See Comparison
NZ_CP044327.1 See Comparison
NZ_CP059754.1 See Comparison
NZ_CP059746.1 See Comparison
NZ_LR135178.1 See Comparison
AP026640.1 See Comparison
NZ_CP065762.1 See Comparison
NZ_CP071968.1 See Comparison
NZ_CP044282.1 See Comparison
NZ_CP059792.1 See Comparison
NZ_CP059815.1 See Comparison
NZ_CP059762.1 See Comparison
NZ_CP059822.1 See Comparison
NZ_CP072585.1 See Comparison
NZ_CP072593.1 See Comparison
NZ_LR135442.1 See Comparison
NZ_CP044327.1 See Comparison
NZ_LR135393.1 See Comparison
AP031266.1 See Comparison
NZ_CP066398.1 See Comparison
NZ_CP059754.1 See Comparison
NZ_CP059746.1 See Comparison
NZ_CP059792.1 See Comparison
NZ_CP071968.1 See Comparison
NZ_CP059815.1 See Comparison
NZ_CP059762.1 See Comparison
NZ_CP059822.1 See Comparison
AP026640.1 See Comparison
NZ_CP065762.1 See Comparison
NZ_CP072585.1 See Comparison
NZ_CP072593.1 See Comparison
NZ_CP044282.1 See Comparison
NZ_CP065762.1 See Comparison
NZ_LR135442.1 See Comparison
NZ_LR135393.1 See Comparison
NZ_CP066398.1 See Comparison
NZ_CP044327.1 See Comparison
NZ_CP059754.1 See Comparison
NZ_CP059746.1 See Comparison
NZ_CP059792.1 See Comparison
NZ_CP059815.1 See Comparison
NZ_CP059762.1 See Comparison
NZ_CP059822.1 See Comparison
AP026640.1 See Comparison
NZ_LR135178.1 See Comparison
NZ_CP072585.1 See Comparison
NZ_CP072593.1 See Comparison
NZ_LR135178.1 See Comparison
NZ_CP044282.1 See Comparison
NZ_LR135442.1 See Comparison
NZ_LR135393.1 See Comparison
NZ_CP071968.1 See Comparison
NZ_CP059792.1 See Comparison
NZ_CP059815.1 See Comparison
NZ_CP059762.1 See Comparison
NZ_CP059822.1 See Comparison
NZ_CP066398.1 See Comparison
NZ_CP044327.1 See Comparison
NZ_CP059754.1 See Comparison
NZ_CP059746.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2