This resource containes bacterial plasmids retrieved from
the NCBI nucleotide database.
An overview of the collected plasmids
can be used to filter the sequences by various parameters such as length, topology, and taxonomic information.
Furthermore, nucleotide sequences can be
searched in the database
by either using Mash for longer sequences (e.g. contigs or long reads),
or by using BLASTn for shorter sequences, e.g. genes.
For more information, please
read our publication and
visit our FAQ page.
Current status
27939 records
How to cite:
Valentina Galata, Tobias Fehlmann, Christina Backes, Andreas Keller; PLSDB: a resource of complete bacterial plasmids, Nucleic Acids Res., 2018 Oct 31, doi: 10.1093/nar/gky1050
mash screen: "Winner-takes-all strategy"
mash dist: Process sequences individually