Plasmid OX030714.1

Sequence

Nucleotide Information

Accession OX030714.1
Description Klebsiella pneumoniae isolate 307 genome assembly, plasmid: P6
Source insd
Topology circular
Length 3516 bp
GC Content 0.55 %
Created at NCBI June 2, 2022



Assembly

Genome Data Information

Accession GCA_905330985.2
Assembly Coverage 162


Biosample

Curated Collection Information
Accession 22316874

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Spain
Original Query Type name
Coordinates (Lat/Lon) 39.33/-4.84
Address Spain

ECOSYSTEM
Original Query Homo sapiens,Hospital de Guadalajara (Guadalajara)
Classification anthropogenic,hospital,host_associated,location
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query diseased
DOID/SYMP
  • Disease (DOID:4 )
    • A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

OW969845.1 See Comparison
OX030755.1 See Comparison
OX030724.1 See Comparison
OW959923.1 See Comparison
OW968272.1 See Comparison
OW969923.1 See Comparison
OW968464.1 See Comparison
OW968221.1 See Comparison
OW968379.1 See Comparison
OW969845.1 See Comparison
OW968370.1 See Comparison
OX030755.1 See Comparison
OX030724.1 See Comparison
OW959923.1 See Comparison
OW968272.1 See Comparison
OW969923.1 See Comparison
OW968464.1 See Comparison
OW968221.1 See Comparison
OW968379.1 See Comparison
OW968370.1 See Comparison
OW969845.1 See Comparison
OX030755.1 See Comparison
OX030724.1 See Comparison
OW959923.1 See Comparison
OW968272.1 See Comparison
OW969923.1 See Comparison
OW968464.1 See Comparison
OW968221.1 See Comparison
OW968379.1 See Comparison
OW968370.1 See Comparison
OW969923.1 See Comparison
OX030755.1 See Comparison
OX030724.1 See Comparison
OX030714.1 See Comparison
OW959923.1 See Comparison
OW969845.1 See Comparison
OW968379.1 See Comparison
OW968464.1 See Comparison
OW968272.1 See Comparison
OW968370.1 See Comparison
OX030755.1 See Comparison
OW968221.1 See Comparison
OX030724.1 See Comparison
OW969923.1 See Comparison
OW969845.1 See Comparison
OW959923.1 See Comparison
OW968379.1 See Comparison
OW968370.1 See Comparison
OW968464.1 See Comparison
OW968272.1 See Comparison
OX030755.1 See Comparison
OW968221.1 See Comparison
OX030724.1 See Comparison
OW969923.1 See Comparison
OW969845.1 See Comparison
OW968464.1 See Comparison
OW968379.1 See Comparison
OW968370.1 See Comparison
OW959923.1 See Comparison
OW968221.1 See Comparison
OW968272.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore