Plasmid OW848814.1

Sequence

Nucleotide Information

Accession OW848814.1
Description Enterobacter cloacae isolate 171 genome assembly, plasmid: P2
Source insd
Topology circular
Length 4804 bp
GC Content 0.46 %
Created at NCBI May 14, 2022



Biosample

Curated Collection Information
Accession 22316624

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Spain
Original Query Type name
Coordinates (Lat/Lon) 39.33/-4.84
Address Spain

ECOSYSTEM
Original Query Homo sapiens,Hospital Universitario Son de Espases (Palma de Mallorca)
Classification anthropogenic,hospital,host_associated,location
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query diseased
DOID/SYMP
  • Disease (DOID:4 )
    • A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.

Visualization

PNG JSON

Plasmids from same Biosample




Plasmid Visualization

JSON GENBANK

SourceElement Name Display Sequence Favorite
PGAGhypothetical proteincopy
PGAGRegulatory protein ropcopy
PGAGhypothetical proteincopy
PGAGhypothetical proteincopy
PGAGhypothetical proteincopy
PGAGMultiple stress resistance protein BhsAcopy
MOB-typerColRNAI_rep_cluster_1987copy
SourceElement NameDisplaySequenceFavorite
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Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACCGeneLocus TagProductProtein idCodon StartTranslation TableGO process
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NUCCORE ACCGeneLocus TagProductProtein idCodon StartTranslation TableGO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACCReplicon TypeRelaxase TypeMPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi NameMash Neighbor DistanceReported Host Range Lit Rank
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NUCCORE ACCReplicon TypeRelaxase TypeMPF TypeOriT TypePredicted MobilityPrimary Cluster IDSecondary Cluster IDObserved Host Range Ncbi NameMash Neighbor DistanceReported Host Range Lit Rank




BLAST results of detected typing markers by MOB-type
biomarkerMOB-suite IDElementStartEndStrandIdentityCoverageEvalueBitscore
repliconCP041116_00002ColRNAI_rep_cluster_19876731144plus88.889914.61e-163580
biomarkerMOB-suite IDElementStartEndStrandIdentityCoverageEvalueBitscore
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Detected typing markers by plasmidfinder
NUCCORE ACCTypingIdentityCoverageStartEndStrandOrganism L1Organism L2
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NUCCORE ACCTypingIdentityCoverageStartEndStrandOrganism L1Organism L2