Plasmid OW635554.1

Sequence

Nucleotide Information

Accession OW635554.1
Description Klebsiella pneumoniae isolate 392 genome assembly, plasmid: P4
Source insd
Topology circular
Length 5599 bp
GC Content 0.51 %
Created at NCBI May 1, 2022



Assembly

Genome Data Information

Accession GCA_905217735.2
Assembly Coverage 271


Biosample

Curated Collection Information

Accession 22316602

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Spain
Original Query Type name
Coordinates (Lat/Lon) 39.33/-4.84
Address Spain

ECOSYSTEM
Original Query Homo sapiens,Hospital Clinic (Barcelona)
Classification anthropogenic,hospital,host_associated,location
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query diseased
DOID/SYMP
  • Disease (DOID:4 )
  • A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.

Visualization


Plasmids from same Biosample



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based on Mash distance

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NZ_CP063838.1 See Comparison
NZ_CP050347.1 See Comparison
NZ_CP050341.1 See Comparison
NZ_CP050359.1 See Comparison
NZ_CP050353.1 See Comparison
NZ_CP107416.1 See Comparison
NZ_CP107472.1 See Comparison
NZ_CP107358.1 See Comparison
NZ_CP107482.1 See Comparison
NZ_CP119016.1 See Comparison
NZ_CP046966.1 See Comparison
NZ_CP116908.1 See Comparison
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NZ_CP107340.1 See Comparison
NZ_CP107378.1 See Comparison
NZ_CP107411.1 See Comparison
NZ_CP107389.1 See Comparison
NZ_CP107451.1 See Comparison
NZ_CP107446.1 See Comparison
NZ_CP107333.1 See Comparison
NZ_CP107311.1 See Comparison
NZ_CP107362.1 See Comparison
NZ_CP107382.1 See Comparison
NZ_CP107440.1 See Comparison
NZ_CP107497.1 See Comparison
NZ_CP107370.1 See Comparison
NZ_CP107487.1 See Comparison
NZ_CP104552.1 See Comparison
NZ_CP102396.1 See Comparison
NZ_CP101545.1 See Comparison
NZ_CP101730.1 See Comparison
NZ_CP101789.1 See Comparison
NZ_CP101769.1 See Comparison
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NZ_CP087644.1 See Comparison
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NZ_CP087610.1 See Comparison
NZ_CP087656.1 See Comparison
NZ_CP095252.1 See Comparison
NZ_CP095268.1 See Comparison
NZ_CP091073.1 See Comparison
CP043368.1 See Comparison
NZ_CP053878.1 See Comparison
NZ_CP090467.1 See Comparison
NZ_CP065559.1 See Comparison
NZ_CP088992.1 See Comparison
NZ_CP082017.1 See Comparison
NZ_CP100092.1 See Comparison
NZ_CP082758.1 See Comparison
NZ_CP082040.1 See Comparison
NZ_CP028789.2 See Comparison
NZ_CP043356.1 See Comparison
NZ_CP028581.2 See Comparison
NZ_CP028540.3 See Comparison
NZ_CP027066.3 See Comparison
NZ_CP040838.1 See Comparison


Plasmid Visualization


NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing


based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore