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v. 2024_05_31_v2
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Typing
Plasmid NZ_PP024953.1
Sequence
Nucleotide Information
Accession
NZ_PP024953.1
Description
Salmonella enterica subsp. enterica serovar Paratyphi B strain TY20019 plasmid TY20019p_286K, complete sequence
Source
refseq
Topology
circular
Length
283352 bp
GC Content
0.48 %
Created at NCBI
April 11, 2024
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Salmonella enterica (57045)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Salmonella (590)
Species
Salmonella_enterica (28901)
Strain
Similar Plasmids
based on Mash distance
NZ_CP100683.1
See Comparison
NZ_CP100686.1
See Comparison
NZ_CP093406.1
See Comparison
NZ_CP093412.1
See Comparison
NZ_CP093408.1
See Comparison
NZ_CP090134.1
See Comparison
NZ_CP090142.1
See Comparison
NZ_CP090138.1
See Comparison
NZ_CP062224.1
See Comparison
NZ_CP039170.1
See Comparison
NZ_PP024954.1
See Comparison
NZ_PP024955.1
See Comparison
NZ_CP037959.1
See Comparison
NZ_CP065095.1
See Comparison
NZ_CP065070.1
See Comparison
NZ_CP065072.1
See Comparison
NZ_OR782950.1
See Comparison
NZ_CP062226.1
See Comparison
NZ_CP093406.1
See Comparison
NZ_CP091637.1
See Comparison
NZ_CP091641.1
See Comparison
NZ_CP100683.1
See Comparison
NZ_CP100686.1
See Comparison
NZ_CP093412.1
See Comparison
NZ_CP093408.1
See Comparison
NZ_CP090142.1
See Comparison
NZ_CP090138.1
See Comparison
NZ_CP039170.1
See Comparison
NZ_CP090134.1
See Comparison
NZ_OR782950.1
See Comparison
NZ_CP037959.1
See Comparison
NZ_CP065095.1
See Comparison
NZ_CP065070.1
See Comparison
NZ_CP065072.1
See Comparison
NZ_PP024954.1
See Comparison
NZ_PP024955.1
See Comparison
NZ_CP062224.1
See Comparison
NZ_CP062226.1
See Comparison
NZ_CP100683.1
See Comparison
NZ_CP091637.1
See Comparison
NZ_CP091641.1
See Comparison
NZ_CP100686.1
See Comparison
NZ_CP039170.1
See Comparison
NZ_CP090138.1
See Comparison
NZ_CP093406.1
See Comparison
NZ_CP093412.1
See Comparison
NZ_CP093408.1
See Comparison
NZ_CP090134.1
See Comparison
NZ_CP090142.1
See Comparison
NZ_OR782950.1
See Comparison
NZ_CP065095.1
See Comparison
NZ_CP065070.1
See Comparison
NZ_CP065072.1
See Comparison
NZ_PP024954.1
See Comparison
NZ_PP024955.1
See Comparison
NZ_CP037959.1
See Comparison
NZ_CP062224.1
See Comparison
NZ_CP062226.1
See Comparison
NZ_CP100683.1
See Comparison
NZ_CP091637.1
See Comparison
NZ_CP091641.1
See Comparison
NZ_CP100686.1
See Comparison
NZ_CP090138.1
See Comparison
NZ_CP093406.1
See Comparison
NZ_CP093412.1
See Comparison
NZ_CP093408.1
See Comparison
NZ_CP037959.1
See Comparison
NZ_CP090134.1
See Comparison
NZ_CP090142.1
See Comparison
NZ_CP039170.1
See Comparison
NZ_PP024954.1
See Comparison
NZ_CP065095.1
See Comparison
NZ_CP065070.1
See Comparison
NZ_CP065072.1
See Comparison
NZ_PP024955.1
See Comparison
NZ_CP039170.1
See Comparison
NZ_CP062226.1
See Comparison
NZ_CP091637.1
See Comparison
NZ_CP091641.1
See Comparison
NZ_CP090138.1
See Comparison
NZ_OR782950.1
See Comparison
NZ_CP062224.1
See Comparison
NZ_CP100683.1
See Comparison
NZ_CP100686.1
See Comparison
NZ_CP093406.1
See Comparison
NZ_CP093412.1
See Comparison
NZ_CP093408.1
See Comparison
NZ_CP090134.1
See Comparison
NZ_CP090142.1
See Comparison
NZ_CP065095.1
See Comparison
NZ_CP037959.1
See Comparison
NZ_CP065070.1
See Comparison
NZ_CP065072.1
See Comparison
NZ_PP024954.1
See Comparison
NZ_PP024955.1
See Comparison
NZ_OR782950.1
See Comparison
NZ_CP062224.1
See Comparison
NZ_CP062226.1
See Comparison
NZ_CP090134.1
See Comparison
NZ_CP091637.1
See Comparison
NZ_CP091641.1
See Comparison
NZ_CP100683.1
See Comparison
NZ_CP100686.1
See Comparison
NZ_CP093406.1
See Comparison
NZ_CP093412.1
See Comparison
NZ_CP093408.1
See Comparison
NZ_CP090142.1
See Comparison
NZ_CP090138.1
See Comparison
NZ_CP039170.1
See Comparison
NZ_CP065095.1
See Comparison
NZ_CP037959.1
See Comparison
NZ_CP065070.1
See Comparison
NZ_CP065072.1
See Comparison
NZ_PP024954.1
See Comparison
NZ_PP024953.1
See Comparison
NZ_PP024955.1
See Comparison
NZ_OR782950.1
See Comparison
NZ_CP062224.1
See Comparison
NZ_CP062226.1
See Comparison
NZ_CP091637.1
See Comparison
NZ_CP091641.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Antimicrobial Resistance
based on NCBIAMRFinder and CARD
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore