Plasmid NZ_OW970554.1

Sequence

Nucleotide Information

Accession NZ_OW970554.1
Description Klebsiella pneumoniae isolate 147 plasmid P1, complete sequence
Source refseq
Topology circular
Length 121066 bp
GC Content 0.53 %
Created at NCBI May 20, 2022



Assembly

Genome Data Information

Accession GCF_903993185.2
Assembly Coverage 401


Biosample

Curated Collection Information
Accession 22316555

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Spain
Original Query Type name
Coordinates (Lat/Lon) 39.33/-4.84
Address Spain

ECOSYSTEM
Original Query Homo sapiens,Hospital Univeristario de Bellvitge (Barcelona)
Classification anthropogenic,hospital,host_associated,location
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query diseased
DOID/SYMP
  • Disease (DOID:4 )
    • A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_OW970358.1 See Comparison
NZ_OW970561.1 See Comparison
NZ_OW970437.1 See Comparison
NZ_OW970531.1 See Comparison
NZ_OW970479.1 See Comparison
NZ_OW970515.1 See Comparison
NZ_OW970487.1 See Comparison
NZ_OW970366.1 See Comparison
NZ_OW970423.1 See Comparison
NZ_OV049814.1 See Comparison
NZ_CP021758.1 See Comparison
NZ_OV049814.1 See Comparison
NZ_OW970358.1 See Comparison
NZ_OW970561.1 See Comparison
NZ_OW970437.1 See Comparison
NZ_OV049814.1 See Comparison
NZ_CP021758.1 See Comparison
NZ_OW970479.1 See Comparison
NZ_OW970515.1 See Comparison
NZ_OW970487.1 See Comparison
NZ_OW970366.1 See Comparison
NZ_OW970423.1 See Comparison
NZ_OW970531.1 See Comparison
NZ_OW970479.1 See Comparison
NZ_OW970515.1 See Comparison
NZ_OW970487.1 See Comparison
NZ_OW970366.1 See Comparison
NZ_OW970423.1 See Comparison
NZ_OW970358.1 See Comparison
NZ_OW970561.1 See Comparison
NZ_OW970437.1 See Comparison
NZ_OW970531.1 See Comparison
NZ_OW970561.1 See Comparison
NZ_CP021758.1 See Comparison
NZ_OW970437.1 See Comparison
NZ_OW970531.1 See Comparison
NZ_OW970358.1 See Comparison
NZ_OW970515.1 See Comparison
NZ_OW970479.1 See Comparison
NZ_OW970487.1 See Comparison
NZ_OW970423.1 See Comparison
NZ_CP021758.1 See Comparison
NZ_OW970366.1 See Comparison
NZ_OV049814.1 See Comparison
NZ_CP021758.1 See Comparison
NZ_OW970358.1 See Comparison
NZ_OW970561.1 See Comparison
NZ_OW970437.1 See Comparison
NZ_OW970531.1 See Comparison
NZ_OW970479.1 See Comparison
NZ_OW970515.1 See Comparison
NZ_OW970487.1 See Comparison
NZ_OW970366.1 See Comparison
NZ_OW970423.1 See Comparison
NZ_OV049814.1 See Comparison
NZ_OW970561.1 See Comparison
NZ_OW970437.1 See Comparison
NZ_OW970531.1 See Comparison
NZ_OW970358.1 See Comparison
NZ_OW970479.1 See Comparison
NZ_OW970366.1 See Comparison
NZ_OW970515.1 See Comparison
NZ_OW970487.1 See Comparison
NZ_OV049814.1 See Comparison
NZ_OW970423.1 See Comparison
NZ_CP021758.1 See Comparison
NZ_OW970423.1 See Comparison
NZ_OW970437.1 See Comparison
NZ_OW970531.1 See Comparison
NZ_OW970479.1 See Comparison
NZ_OW970515.1 See Comparison
NZ_OW970487.1 See Comparison
NZ_OW970366.1 See Comparison
NZ_OW970554.1 See Comparison
NZ_OW970358.1 See Comparison
NZ_OW970561.1 See Comparison
NZ_CP021758.1 See Comparison
NZ_OV049814.1 See Comparison


Plasmid Visualization

JSON GENBANK

SourceElement Name Display Sequence Favorite
amrfinderpluscatBcopy
rgirmtFcopy
amrfinderplusarr-2copy
amrfinderplusrmtF1copy
amrfinderplusaac(6')-Ibcopy
PGAGRepB family plasmid replication initiator proteincopy
PGAGParA family plasmid-partitioning AAA ATPasecopy
PGAGhypothetical proteincopy
PGAGsite-specific integrasecopy
PGAGhypothetical proteincopy
SourceElement NameDisplaySequenceFavorite
Showing 1 to 10 of 136 entries
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Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACCGeneLocus TagProductProtein idCodon StartTranslation TableGO process
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NUCCORE ACCGeneLocus TagProductProtein idCodon StartTranslation TableGO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACCAnalysis Software NameReference Database VersionGene SymbolGene NameDrug ClassAntimicrobial AgentGene StartGene StopGene LengthStrand OrientationSequence Identity (%)Coverage (%)
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NUCCORE ACCAnalysis Software NameReference Database VersionGene SymbolGene NameDrug ClassAntimicrobial AgentGene StartGene StopGene LengthStrand OrientationSequence Identity (%)Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACCReplicon TypeRelaxase TypeMPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi NameMash Neighbor DistanceReported Host Range Lit Rank
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NUCCORE ACCReplicon TypeRelaxase TypeMPF TypeOriT TypePredicted MobilityPrimary Cluster IDSecondary Cluster IDObserved Host Range Ncbi NameMash Neighbor DistanceReported Host Range Lit Rank




BLAST results of detected typing markers by MOB-type
biomarkerMOB-suite IDElementStartEndStrandIdentityCoverageEvalueBitscore
replicon000759__NC_013950_00034rep_cluster_141819894plus99.88610001613
replicon000118__KJ958926_00047IncFII6935570056minus10010001297
relaxaseNC_021198_00256MOBP102308104233minus10010001294
mate-pair-formationNC_021198_00230MPF_I7488775702plus1001000568
mate-pair-formationNC_021198_00234MPF_I8050880858plus1001005.190000000000004e-72239
mate-pair-formationNC_021198_00235MPF_I8089781598plus1001006.92e-156485
mate-pair-formationNC_021198_00236MPF_I8161282712plus1001000655
mate-pair-formationNC_021198_00238MPF_I8406584781plus1001004.38e-145454
mate-pair-formationNC_021198_00239MPF_I8479485324plus1001009.72e-83272
mate-pair-formationNC_021198_00240MPF_I8538185767plus100973.23e-70234
biomarkerMOB-suite IDElementStartEndStrandIdentityCoverageEvalueBitscore
Showing 1 to 10 of 12 entries


Detected typing markers by plasmidfinder
NUCCORE ACCTypingIdentityCoverageStartEndStrandOrganism L1Organism L2
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NUCCORE ACCTypingIdentityCoverageStartEndStrandOrganism L1Organism L2