Plasmid NZ_OR916391.1

Sequence

Nucleotide Information

Accession NZ_OR916391.1
Description Escherichia coli strain SB17033 plasmid pSB17033, complete sequence
Source refseq
Topology circular
Length 120714 bp
GC Content 0.54 %
Created at NCBI March 11, 2024





Similar Plasmids

based on Mash distance

NZ_OR916390.1 See Comparison
NZ_CP141248.1 See Comparison
NZ_CP141250.1 See Comparison
NZ_CP141249.1 See Comparison
NZ_CP141242.1 See Comparison
NZ_CP141245.1 See Comparison
NZ_CP141241.1 See Comparison
NZ_CP141246.1 See Comparison
NZ_CP141244.1 See Comparison
NZ_CP141224.1 See Comparison
NZ_CP141232.1 See Comparison
NZ_CP141247.1 See Comparison
NZ_CP141243.1 See Comparison
NZ_CP141227.1 See Comparison
NZ_MW390545.1 See Comparison
NZ_CP056076.1 See Comparison
NZ_CP104518.1 See Comparison
CP082750.1 See Comparison
NZ_MT707656.1 See Comparison
NZ_MT725450.1 See Comparison
CP082750.1 See Comparison
NZ_MW390545.1 See Comparison
NZ_MT707656.1 See Comparison
NZ_MT725450.1 See Comparison
NZ_CP135961.1 See Comparison
NZ_OR916390.1 See Comparison
NZ_CP141248.1 See Comparison
NZ_CP141250.1 See Comparison
NZ_CP141249.1 See Comparison
NZ_CP141242.1 See Comparison
NZ_CP141245.1 See Comparison
NZ_CP141241.1 See Comparison
NZ_CP141246.1 See Comparison
NZ_CP141244.1 See Comparison
NZ_CP141224.1 See Comparison
NZ_CP141232.1 See Comparison
NZ_CP141247.1 See Comparison
NZ_CP141243.1 See Comparison
NZ_CP141227.1 See Comparison
NZ_CP056076.1 See Comparison
NZ_CP104518.1 See Comparison
NZ_CP104518.1 See Comparison
NZ_CP135961.1 See Comparison
NZ_OR916390.1 See Comparison
NZ_OR916391.1 See Comparison
NZ_CP056076.1 See Comparison
NZ_CP141248.1 See Comparison
NZ_CP141250.1 See Comparison
NZ_CP141249.1 See Comparison
NZ_CP141242.1 See Comparison
NZ_CP141245.1 See Comparison
NZ_CP141241.1 See Comparison
NZ_CP141246.1 See Comparison
NZ_CP141244.1 See Comparison
NZ_CP141224.1 See Comparison
NZ_CP141232.1 See Comparison
NZ_CP141247.1 See Comparison
NZ_CP141243.1 See Comparison
NZ_CP141227.1 See Comparison
NZ_MW390545.1 See Comparison
NZ_MT707656.1 See Comparison
NZ_MT725450.1 See Comparison
NZ_CP135961.1 See Comparison
CP082750.1 See Comparison
NZ_CP141248.1 See Comparison
NZ_OR916390.1 See Comparison
NZ_CP141250.1 See Comparison
NZ_CP141249.1 See Comparison
NZ_CP141242.1 See Comparison
NZ_CP141245.1 See Comparison
NZ_CP141241.1 See Comparison
NZ_CP141246.1 See Comparison
NZ_CP141244.1 See Comparison
NZ_CP141224.1 See Comparison
NZ_CP141232.1 See Comparison
NZ_CP141247.1 See Comparison
NZ_CP141243.1 See Comparison
NZ_CP141227.1 See Comparison
NZ_CP104518.1 See Comparison
NZ_MW390545.1 See Comparison
NZ_CP056076.1 See Comparison
CP082750.1 See Comparison
NZ_MT707656.1 See Comparison
NZ_MT725450.1 See Comparison
NZ_OR916390.1 See Comparison
NZ_CP135961.1 See Comparison
NZ_CP141248.1 See Comparison
NZ_CP141250.1 See Comparison
NZ_CP141249.1 See Comparison
NZ_CP141242.1 See Comparison
NZ_CP141245.1 See Comparison
NZ_CP141241.1 See Comparison
NZ_CP141246.1 See Comparison
NZ_CP141244.1 See Comparison
NZ_CP141224.1 See Comparison
NZ_CP141232.1 See Comparison
NZ_CP141247.1 See Comparison
NZ_CP141243.1 See Comparison
NZ_CP141227.1 See Comparison
NZ_CP056076.1 See Comparison
NZ_MW390545.1 See Comparison
NZ_CP104518.1 See Comparison
NZ_MT707656.1 See Comparison
NZ_MT725450.1 See Comparison
NZ_MW390545.1 See Comparison
CP082750.1 See Comparison
NZ_CP135961.1 See Comparison
NZ_OR916390.1 See Comparison
NZ_CP141248.1 See Comparison
NZ_CP141250.1 See Comparison
NZ_CP141249.1 See Comparison
NZ_CP141242.1 See Comparison
NZ_CP141245.1 See Comparison
NZ_CP141241.1 See Comparison
NZ_CP141246.1 See Comparison
NZ_CP141244.1 See Comparison
NZ_CP141224.1 See Comparison
NZ_CP141232.1 See Comparison
NZ_CP141247.1 See Comparison
NZ_CP141243.1 See Comparison
NZ_CP141227.1 See Comparison
NZ_CP104518.1 See Comparison
NZ_CP056076.1 See Comparison
CP082750.1 See Comparison
NZ_CP135961.1 See Comparison
NZ_OR916390.1 See Comparison
NZ_CP141248.1 See Comparison
NZ_CP141250.1 See Comparison
NZ_CP141249.1 See Comparison
NZ_CP141242.1 See Comparison
NZ_CP141245.1 See Comparison
NZ_CP141241.1 See Comparison
NZ_CP141246.1 See Comparison
NZ_CP141244.1 See Comparison
NZ_CP141224.1 See Comparison
NZ_CP141232.1 See Comparison
NZ_CP141247.1 See Comparison
NZ_CP141243.1 See Comparison
NZ_CP141227.1 See Comparison
NZ_MW390545.1 See Comparison
NZ_CP056076.1 See Comparison
NZ_CP135961.1 See Comparison
NZ_MT707656.1 See Comparison
NZ_MT725450.1 See Comparison
NZ_CP104518.1 See Comparison
NZ_MT707656.1 See Comparison
NZ_MT725450.1 See Comparison
CP082750.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2