Plasmid NZ_ON016104.1

Sequence

Nucleotide Information

Accession NZ_ON016104.1
Description Bacillus thuringiensis strain SY49.1 plasmid pSY49.1_6, complete sequence
Source refseq
Topology circular
Length 8513 bp
GC Content 0.31 %
Created at NCBI Oct. 10, 2022


Host Taxonomy

According to NCBI Taxonomy

Assigned Host Bacillus thuringiensis (1428)
Lineage
Superkingdom Bacteria (2)
Phylum Bacillota (1239)
Class Bacilli (91061)
Order Bacillales (1385)
Family Bacillaceae (186817)
Genus Bacillus (1386)
Species Bacillus_thuringiensis (1428)
Strain




Similar Plasmids

based on Mash distance

NZ_CP116336.1 See Comparison
NZ_CP116322.1 See Comparison
NZ_ON470177.1 See Comparison
NZ_CP091115.1 See Comparison
NZ_CP091114.1 See Comparison
NZ_CP013061.1 See Comparison
NZ_CP083111.1 See Comparison
NZ_CP083124.1 See Comparison
NZ_CP011354.1 See Comparison
NZ_CP004864.1 See Comparison
NC_020241.1 See Comparison
NC_018886.1 See Comparison
NC_017207.1 See Comparison
NZ_CP007611.1 See Comparison
NZ_CP013061.1 See Comparison
NZ_CP116336.1 See Comparison
NZ_CP116322.1 See Comparison
NZ_CP011354.1 See Comparison
NZ_ON470177.1 See Comparison
NZ_CP091115.1 See Comparison
NZ_CP091114.1 See Comparison
NZ_CP083111.1 See Comparison
NZ_CP083124.1 See Comparison
NZ_ON470177.1 See Comparison
NC_020241.1 See Comparison
NZ_CP116336.1 See Comparison
NZ_CP116322.1 See Comparison
NZ_CP004864.1 See Comparison
NZ_CP007611.1 See Comparison
NC_018886.1 See Comparison
NC_017207.1 See Comparison
NZ_CP011354.1 See Comparison
NZ_CP091115.1 See Comparison
NZ_CP091114.1 See Comparison
NZ_CP083111.1 See Comparison
NZ_CP083124.1 See Comparison
NZ_CP013061.1 See Comparison
NZ_CP004864.1 See Comparison
NZ_CP007611.1 See Comparison
NC_020241.1 See Comparison
NZ_CP091115.1 See Comparison
NC_018886.1 See Comparison
NC_017207.1 See Comparison
NZ_CP116336.1 See Comparison
NZ_CP116322.1 See Comparison
NZ_ON470177.1 See Comparison
NZ_CP091114.1 See Comparison
NZ_ON016104.1 See Comparison
NZ_CP083111.1 See Comparison
NZ_CP083124.1 See Comparison
NZ_CP013061.1 See Comparison
NZ_CP004864.1 See Comparison
NZ_CP007611.1 See Comparison
NC_018886.1 See Comparison
NC_017207.1 See Comparison
NZ_CP116336.1 See Comparison
NZ_CP116322.1 See Comparison
NZ_CP011354.1 See Comparison
NC_020241.1 See Comparison
NZ_CP091115.1 See Comparison
NZ_ON470177.1 See Comparison
NZ_CP091114.1 See Comparison
NZ_CP011354.1 See Comparison
NZ_CP083111.1 See Comparison
NZ_CP083124.1 See Comparison
NZ_CP013061.1 See Comparison
NC_018886.1 See Comparison
NZ_CP004864.1 See Comparison
NZ_CP007611.1 See Comparison
NC_017207.1 See Comparison
NC_020241.1 See Comparison
NZ_CP116336.1 See Comparison
NZ_CP116322.1 See Comparison
NZ_CP083111.1 See Comparison
NZ_ON470177.1 See Comparison
NZ_CP091115.1 See Comparison
NZ_CP091114.1 See Comparison
NZ_CP083124.1 See Comparison
NZ_CP011354.1 See Comparison
NZ_CP013061.1 See Comparison
NC_020241.1 See Comparison
NZ_CP004864.1 See Comparison
NZ_CP007611.1 See Comparison
NZ_CP011354.1 See Comparison
NC_018886.1 See Comparison
NZ_CP083111.1 See Comparison
NZ_CP083124.1 See Comparison
NC_017207.1 See Comparison
NZ_CP116336.1 See Comparison
NZ_CP116322.1 See Comparison
NZ_ON470177.1 See Comparison
NZ_CP091115.1 See Comparison
NZ_CP091114.1 See Comparison
NZ_CP013061.1 See Comparison
NC_018886.1 See Comparison
NC_017207.1 See Comparison
NZ_CP004864.1 See Comparison
NZ_CP007611.1 See Comparison
NC_020241.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2