Plasmid NZ_MG710483.1

Sequence

Nucleotide Information

Accession NZ_MG710483.1
Description Bacillus thuringiensis serovar israelensis strain Bti-UFT6.51 plasmid pBtiUFT6.51.2, complete sequence
Source refseq
Topology circular
Length 8279 bp
GC Content 0.30 %
Created at NCBI June 3, 2020


Host Taxonomy

According to NCBI Taxonomy

Assigned Host Bacillus thuringiensis (1430)
Lineage
Superkingdom Bacteria (2)
Phylum Bacillota (1239)
Class Bacilli (91061)
Order Bacillales (1385)
Family Bacillaceae (186817)
Genus Bacillus (1386)
Species Bacillus_thuringiensis (1428)
Strain


Biosample

Curated Collection Information
Accession 10679998

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 11.75S;49.05W
Original Query Type coordinates
Coordinates (Lat/Lon) -11.75/-49.05
Address Gurupi, Região Geográfica Imediata de Gurupi, Região Geográfica Intermediária de Gurupi, Tocantins, North Region, 77410-540, Brazil

ECOSYSTEM
Original Query Cell culture,soil
Classification cell_culture,soil
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON



Similar Plasmids

based on Mash distance

NZ_CP004865.1 See Comparison
NZ_ON470176.1 See Comparison
NZ_CP004880.1 See Comparison
NZ_CP116335.1 See Comparison
NZ_CP083167.1 See Comparison
NZ_CP083112.1 See Comparison
NZ_CP083125.1 See Comparison
NZ_CP007610.1 See Comparison
NC_020242.1 See Comparison
NC_018881.1 See Comparison
NZ_ON470176.1 See Comparison
NZ_CP116335.1 See Comparison
NZ_CP004865.1 See Comparison
NZ_CP083167.1 See Comparison
NZ_CP083112.1 See Comparison
NZ_CP083125.1 See Comparison
NZ_CP004880.1 See Comparison
NZ_CP007610.1 See Comparison
NC_018881.1 See Comparison
NC_020242.1 See Comparison
NZ_CP083167.1 See Comparison
NZ_MG710483.1 See Comparison
NZ_CP116335.1 See Comparison
NZ_ON470176.1 See Comparison
NZ_CP083112.1 See Comparison
NZ_CP083125.1 See Comparison
NZ_CP004880.1 See Comparison
NZ_ON470176.1 See Comparison
NZ_CP004865.1 See Comparison
NZ_CP007610.1 See Comparison
NC_020242.1 See Comparison
NZ_CP116335.1 See Comparison
NZ_ON470176.1 See Comparison
NZ_CP004865.1 See Comparison
NZ_CP007610.1 See Comparison
NZ_ON470176.1 See Comparison
NZ_CP004880.1 See Comparison
NC_020242.1 See Comparison
NC_018881.1 See Comparison
NZ_CP004865.1 See Comparison
NZ_CP007610.1 See Comparison
NC_018881.1 See Comparison
NC_018881.1 See Comparison
NZ_CP083167.1 See Comparison
NZ_CP083112.1 See Comparison
NZ_CP083125.1 See Comparison
NZ_CP004880.1 See Comparison
NC_020242.1 See Comparison
NC_018881.1 See Comparison
NZ_CP116335.1 See Comparison
NZ_CP083167.1 See Comparison
NZ_CP083112.1 See Comparison
NZ_CP083125.1 See Comparison
NZ_CP004865.1 See Comparison
NZ_CP007610.1 See Comparison
NZ_CP116335.1 See Comparison
NZ_ON470176.1 See Comparison
NZ_CP083167.1 See Comparison
NZ_CP083112.1 See Comparison
NZ_CP083125.1 See Comparison
NZ_CP004880.1 See Comparison
NC_020242.1 See Comparison
NZ_CP116335.1 See Comparison
NZ_CP083167.1 See Comparison
NZ_CP083112.1 See Comparison
NZ_CP083125.1 See Comparison
NZ_CP004880.1 See Comparison
NZ_CP004865.1 See Comparison
NZ_CP007610.1 See Comparison
NC_020242.1 See Comparison
NC_018881.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2