PLSDB
v. 2024_05_31_v2
Home
Browse
Sequence Search
Statistics
Download
API
FAQ
Sequence
Host Taxonomy
Assembly
Biosample
Similar Plasmids
Visualization
Annotations
Typing
Plasmid NZ_LR890683.1
Sequence
Nucleotide Information
Accession
NZ_LR890683.1
Description
Klebsiella pneumoniae strain INF279 isolate INF279 plasmid 5, complete sequence
Source
refseq
Topology
circular
Length
3514 bp
GC Content
0.54 %
Created at NCBI
Oct. 30, 2020
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Klebsiella pneumoniae (573)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Klebsiella (570)
Species
Klebsiella_pneumoniae (573)
Strain
Assembly
Genome Data Information
Accession
GCF_904866405.1
Assembly Coverage
59
Biosample
Curated Collection Information
Accession
4042729
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
Australia
Original Query Type
name
Coordinates (Lat/Lon)
-24.78/134.76
Address
Australia
ECOSYSTEM
Original Query
Homo sapiens,urine
Classification
host_associated,urinary_system
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
diseased
DOID/SYMP
Disease
(
DOID:4
)
A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.
Visualization
PNG
JSON
Collapse all
Expand all
Plasmids from same Biosample
NZ_LR890685.1
NZ_LR890684.1
NZ_LR890682.1
NZ_LR890681.1
NZ_LR890680.1
Similar Plasmids
based on Mash distance
NZ_CP141556.1
See Comparison
NZ_CP058185.1
See Comparison
NZ_LR890739.1
See Comparison
NZ_LR890419.1
See Comparison
NZ_LR890378.1
See Comparison
NZ_CP065169.1
See Comparison
LR890746.1
See Comparison
LR890530.1
See Comparison
LR890462.1
See Comparison
LR890404.1
See Comparison
LR890280.1
See Comparison
NZ_CP089389.1
See Comparison
NZ_LR890419.1
See Comparison
NZ_CP083795.1
See Comparison
NZ_CP083801.1
See Comparison
NZ_CP024493.1
See Comparison
CP024486.1
See Comparison
NZ_LR890739.1
See Comparison
NZ_CP008845.1
See Comparison
NZ_CP141556.1
See Comparison
NZ_CP058185.1
See Comparison
NZ_LR890378.1
See Comparison
NZ_CP008845.1
See Comparison
NZ_CP065169.1
See Comparison
NZ_CP083795.1
See Comparison
NZ_CP083801.1
See Comparison
LR890746.1
See Comparison
LR890530.1
See Comparison
LR890462.1
See Comparison
LR890404.1
See Comparison
LR890280.1
See Comparison
NZ_CP089389.1
See Comparison
NZ_LR890378.1
See Comparison
NZ_CP024493.1
See Comparison
CP024486.1
See Comparison
NZ_CP141556.1
See Comparison
NZ_CP058185.1
See Comparison
NZ_LR890419.1
See Comparison
NZ_CP065169.1
See Comparison
NZ_LR890739.1
See Comparison
NZ_CP083795.1
See Comparison
LR890746.1
See Comparison
LR890530.1
See Comparison
LR890462.1
See Comparison
LR890404.1
See Comparison
LR890280.1
See Comparison
NZ_CP089389.1
See Comparison
NZ_CP083801.1
See Comparison
NZ_CP008845.1
See Comparison
NZ_CP141556.1
See Comparison
NZ_CP024493.1
See Comparison
CP024486.1
See Comparison
NZ_CP058185.1
See Comparison
NZ_LR890419.1
See Comparison
NZ_LR890739.1
See Comparison
NZ_LR890683.1
See Comparison
NZ_LR890378.1
See Comparison
LR890404.1
See Comparison
NZ_CP065169.1
See Comparison
LR890280.1
See Comparison
NZ_CP089389.1
See Comparison
LR890746.1
See Comparison
LR890530.1
See Comparison
LR890462.1
See Comparison
NZ_CP083795.1
See Comparison
NZ_CP083801.1
See Comparison
NZ_CP024493.1
See Comparison
NZ_CP008845.1
See Comparison
CP024486.1
See Comparison
NZ_CP065169.1
See Comparison
NZ_LR890378.1
See Comparison
NZ_CP141556.1
See Comparison
NZ_CP058185.1
See Comparison
NZ_LR890739.1
See Comparison
NZ_LR890419.1
See Comparison
LR890746.1
See Comparison
LR890530.1
See Comparison
LR890462.1
See Comparison
LR890404.1
See Comparison
LR890280.1
See Comparison
NZ_CP089389.1
See Comparison
NZ_CP083795.1
See Comparison
NZ_CP083801.1
See Comparison
NZ_CP008845.1
See Comparison
NZ_LR890378.1
See Comparison
NZ_CP024493.1
See Comparison
CP024486.1
See Comparison
NZ_CP141556.1
See Comparison
NZ_CP058185.1
See Comparison
NZ_LR890739.1
See Comparison
NZ_LR890419.1
See Comparison
LR890746.1
See Comparison
NZ_CP065169.1
See Comparison
LR890530.1
See Comparison
LR890462.1
See Comparison
LR890404.1
See Comparison
LR890280.1
See Comparison
NZ_CP083795.1
See Comparison
NZ_CP008845.1
See Comparison
NZ_CP089389.1
See Comparison
NZ_CP083801.1
See Comparison
NZ_CP024493.1
See Comparison
CP024486.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore