Plasmid NZ_KX592672.1

Sequence

Nucleotide Information

Accession NZ_KX592672.1
Description Escherichia coli plasmid pEc_04HAE12, complete sequence
Source refseq
Topology circular
Length 59939 bp
GC Content 0.42 %
Created at NCBI July 31, 2020



Biosample

Curated Collection Information
Accession 14227055

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query China
Original Query Type name
Coordinates (Lat/Lon) 34.41/86.03
Address China

ECOSYSTEM
Original Query Homo sapiens,blood
Classification blood,circulatory_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON



Similar Plasmids

based on Mash distance

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LC712329.1 See Comparison
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NZ_CP047014.1 See Comparison
NZ_MW264506.1 See Comparison
NZ_CP032081.1 See Comparison
NZ_AP027443.1 See Comparison
NZ_AP018806.1 See Comparison
NZ_CP129275.1 See Comparison
NZ_CP126510.1 See Comparison
NZ_LC473131.1 See Comparison
NZ_KX856067.1 See Comparison
NZ_AP027636.1 See Comparison
NZ_AP027497.1 See Comparison
NZ_MN232209.1 See Comparison
NZ_KX592672.1 See Comparison
NZ_MN232193.1 See Comparison
NZ_MN232187.1 See Comparison
NZ_LC469775.1 See Comparison
NZ_AP018412.1 See Comparison
NZ_MG594799.1 See Comparison
NZ_MH522415.1 See Comparison
NZ_MG598815.1 See Comparison
NZ_MH522414.1 See Comparison
NZ_KY471309.1 See Comparison
NZ_MH522416.1 See Comparison
NZ_KY120366.1 See Comparison
NZ_KY795977.1 See Comparison
NZ_MG210940.1 See Comparison
NZ_KY363994.1 See Comparison
NZ_KU934208.1 See Comparison
NZ_KY363995.1 See Comparison
NZ_KY363998.1 See Comparison
NZ_CP051226.1 See Comparison
NZ_MN746291.1 See Comparison
NZ_MT929290.1 See Comparison
NZ_MT929283.1 See Comparison
NZ_MW264506.1 See Comparison
NZ_OP434482.1 See Comparison
AP027410.1 See Comparison
LC712384.1 See Comparison
LC712329.1 See Comparison
LC709173.1 See Comparison
NZ_CP129275.1 See Comparison
NZ_CP047014.1 See Comparison
NZ_CP032081.1 See Comparison
NZ_AP018806.1 See Comparison
NZ_LC473131.1 See Comparison
NZ_CP126510.1 See Comparison
NZ_KX856067.1 See Comparison
NZ_AP027443.1 See Comparison
NZ_AP027636.1 See Comparison
NZ_AP027497.1 See Comparison
NZ_MN232209.1 See Comparison
NZ_MN232193.1 See Comparison
NZ_MN232187.1 See Comparison
NZ_LC469775.1 See Comparison
NZ_AP018412.1 See Comparison
NZ_MG594799.1 See Comparison
NZ_MG598815.1 See Comparison
NZ_MG210940.1 See Comparison
NZ_MH522415.1 See Comparison
NZ_MH522414.1 See Comparison
NZ_MH522416.1 See Comparison
NZ_KY795977.1 See Comparison
NZ_KY471309.1 See Comparison
NZ_KU934208.1 See Comparison
NZ_MT929290.1 See Comparison
NZ_KY120366.1 See Comparison
NZ_KY363994.1 See Comparison
NZ_KY363998.1 See Comparison
NZ_KY363995.1 See Comparison
NZ_CP051226.1 See Comparison
NZ_MT929283.1 See Comparison
NZ_CP047014.1 See Comparison
NZ_MN746291.1 See Comparison
NZ_OP434482.1 See Comparison
LC712384.1 See Comparison
LC712329.1 See Comparison
LC709173.1 See Comparison
AP027410.1 See Comparison
NZ_MW264506.1 See Comparison
NZ_CP032081.1 See Comparison
NZ_AP018806.1 See Comparison
NZ_CP129275.1 See Comparison
NZ_LC473131.1 See Comparison
NZ_AP027636.1 See Comparison
NZ_KX856067.1 See Comparison
NZ_AP027443.1 See Comparison
NZ_CP126510.1 See Comparison
NZ_AP027497.1 See Comparison
NZ_MN232209.1 See Comparison
NZ_MN232193.1 See Comparison
NZ_MN232187.1 See Comparison
NZ_LC469775.1 See Comparison
NZ_AP018412.1 See Comparison
NZ_MG210940.1 See Comparison
NZ_MG594799.1 See Comparison
NZ_MG598815.1 See Comparison
NZ_MH522415.1 See Comparison
NZ_MH522414.1 See Comparison
NZ_MH522416.1 See Comparison
NZ_KU934208.1 See Comparison
NZ_KY471309.1 See Comparison
NZ_CP051226.1 See Comparison
NZ_KY120366.1 See Comparison
NZ_KY363994.1 See Comparison
NZ_KY363998.1 See Comparison
NZ_KY363995.1 See Comparison
NZ_KY795977.1 See Comparison
AP027410.1 See Comparison
NZ_MT929290.1 See Comparison
NZ_MT929283.1 See Comparison
NZ_MN746291.1 See Comparison
NZ_MW264506.1 See Comparison
LC712384.1 See Comparison
LC712329.1 See Comparison
LC709173.1 See Comparison
NZ_OP434482.1 See Comparison
NZ_CP047014.1 See Comparison
NZ_CP032081.1 See Comparison
NZ_AP018806.1 See Comparison
NZ_CP129275.1 See Comparison
NZ_MH522415.1 See Comparison
NZ_CP126510.1 See Comparison
NZ_AP027636.1 See Comparison
NZ_AP027497.1 See Comparison
NZ_KX856067.1 See Comparison
NZ_MN232209.1 See Comparison
NZ_MG594799.1 See Comparison
NZ_AP027443.1 See Comparison
NZ_MN232193.1 See Comparison
NZ_MN232187.1 See Comparison
NZ_LC473131.1 See Comparison
NZ_LC469775.1 See Comparison
NZ_AP018412.1 See Comparison
NZ_MH522414.1 See Comparison
NZ_MG598815.1 See Comparison
NZ_MH522416.1 See Comparison
NZ_KY795977.1 See Comparison
NZ_KY471309.1 See Comparison
NZ_KY120366.1 See Comparison
NZ_MG210940.1 See Comparison
NZ_KY363994.1 See Comparison
NZ_KU934208.1 See Comparison
NZ_KY363998.1 See Comparison
NZ_KY363995.1 See Comparison
NZ_CP051226.1 See Comparison
NZ_OP434482.1 See Comparison
AP027410.1 See Comparison
NZ_MT929290.1 See Comparison
NZ_MT929283.1 See Comparison
NZ_MN746291.1 See Comparison
NZ_CP047014.1 See Comparison
LC712384.1 See Comparison
LC712329.1 See Comparison
LC709173.1 See Comparison
NZ_MW264506.1 See Comparison
NZ_CP032081.1 See Comparison
NZ_AP018806.1 See Comparison
NZ_AP027443.1 See Comparison
NZ_CP126510.1 See Comparison
NZ_CP129275.1 See Comparison
NZ_MN232193.1 See Comparison
NZ_AP027636.1 See Comparison
NZ_AP027497.1 See Comparison
NZ_MN232187.1 See Comparison
NZ_KX856067.1 See Comparison
NZ_MG210940.1 See Comparison
NZ_MN232209.1 See Comparison
NZ_MH522415.1 See Comparison
NZ_MH522414.1 See Comparison
NZ_MH522416.1 See Comparison
NZ_LC473131.1 See Comparison
NZ_LC469775.1 See Comparison
NZ_AP018412.1 See Comparison
NZ_MG594799.1 See Comparison
NZ_MG598815.1 See Comparison
NZ_KU934208.1 See Comparison
NZ_KY471309.1 See Comparison
NZ_MT929290.1 See Comparison
NZ_KY120366.1 See Comparison
NZ_CP051226.1 See Comparison
NZ_MT929283.1 See Comparison
NZ_KY795977.1 See Comparison
NZ_KY363994.1 See Comparison
NZ_KY363998.1 See Comparison
NZ_KY363995.1 See Comparison
NZ_OP434482.1 See Comparison
NZ_MN746291.1 See Comparison
AP027410.1 See Comparison
LC712384.1 See Comparison
LC712329.1 See Comparison
LC709173.1 See Comparison
NZ_AP027443.1 See Comparison
NZ_CP047014.1 See Comparison
NZ_CP032081.1 See Comparison
NZ_MW264506.1 See Comparison
NZ_AP018806.1 See Comparison
NZ_CP129275.1 See Comparison
NZ_KX856067.1 See Comparison
NZ_AP027636.1 See Comparison
NZ_AP027497.1 See Comparison
NZ_CP126510.1 See Comparison
NZ_MN232209.1 See Comparison
NZ_MN232187.1 See Comparison
NZ_MN232193.1 See Comparison
NZ_MH522415.1 See Comparison
NZ_LC473131.1 See Comparison
NZ_LC469775.1 See Comparison
NZ_AP018412.1 See Comparison
NZ_MH522414.1 See Comparison
NZ_MH522416.1 See Comparison
NZ_MG598815.1 See Comparison
NZ_MG594799.1 See Comparison
NZ_KY795977.1 See Comparison
NZ_KY471309.1 See Comparison
NZ_CP051226.1 See Comparison
NZ_KY120366.1 See Comparison
NZ_KY363994.1 See Comparison
NZ_KY363998.1 See Comparison
NZ_KY363995.1 See Comparison
NZ_MG210940.1 See Comparison
NZ_KU934208.1 See Comparison
NZ_MT929290.1 See Comparison
NZ_MT929283.1 See Comparison
NZ_MN746291.1 See Comparison
NZ_OP434482.1 See Comparison
LC712384.1 See Comparison
LC712329.1 See Comparison
LC709173.1 See Comparison
AP027410.1 See Comparison
NZ_MW264506.1 See Comparison
NZ_CP047014.1 See Comparison
NZ_CP032081.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2