Plasmid NZ_KT693145.1

Sequence

Nucleotide Information

Accession NZ_KT693145.1
Description Escherichia coli strain E35BA plasmid pE35BA_1, complete sequence
Source refseq
Topology circular
Length 4130 bp
GC Content 0.50 %
Created at NCBI June 3, 2020



Biosample

Curated Collection Information
Accession 14226387

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query None
Original Query Type None
Coordinates (Lat/Lon)
Address None

ECOSYSTEM
Original Query ESBL clinical isolate
Classification material,organic
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON



Similar Plasmids

based on Mash distance

CP125079.1 See Comparison
CP056526.1 See Comparison
CP056306.1 See Comparison
NZ_LT985255.1 See Comparison
NZ_CP117005.1 See Comparison
NZ_LR890469.1 See Comparison
NZ_LR890305.1 See Comparison
NZ_LR890469.1 See Comparison
NZ_CP104672.1 See Comparison
CP125079.1 See Comparison
CP056306.1 See Comparison
NZ_AP024691.1 See Comparison
CP056526.1 See Comparison
NZ_LT985255.1 See Comparison
NZ_LR890305.1 See Comparison
CP056306.1 See Comparison
NZ_CP117005.1 See Comparison
NZ_CP104672.1 See Comparison
NZ_AP024691.1 See Comparison
CP125079.1 See Comparison
NZ_LR890469.1 See Comparison
NZ_LT985255.1 See Comparison
CP056526.1 See Comparison
NZ_KT693145.1 See Comparison
NZ_LR890305.1 See Comparison
NZ_CP104672.1 See Comparison
NZ_CP117005.1 See Comparison
NZ_CP117005.1 See Comparison
CP125079.1 See Comparison
NZ_LT985255.1 See Comparison
NZ_LR890469.1 See Comparison
NZ_AP024691.1 See Comparison
CP056526.1 See Comparison
CP056306.1 See Comparison
NZ_LR890305.1 See Comparison
NZ_AP024691.1 See Comparison
NZ_CP104672.1 See Comparison
CP125079.1 See Comparison
NZ_LT985255.1 See Comparison
CP056526.1 See Comparison
CP056306.1 See Comparison
NZ_LR890469.1 See Comparison
NZ_CP117005.1 See Comparison
NZ_LR890305.1 See Comparison
CP125079.1 See Comparison
NZ_CP104672.1 See Comparison
NZ_AP024691.1 See Comparison
NZ_LR890469.1 See Comparison
NZ_LT985255.1 See Comparison
CP056526.1 See Comparison
CP056306.1 See Comparison
NZ_LR890305.1 See Comparison
NZ_CP117005.1 See Comparison
NZ_CP104672.1 See Comparison
NZ_AP024691.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore