Plasmid NZ_CP149231.1

Sequence

Nucleotide Information

Accession	NZ_CP149231.1
Description	Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain Z1323HSL0013 plasmid pZ1323HSL0013-4, complete sequence
Source	refseq
Topology	circular
Length	2137 bp
GC Content	0.52 %
Created at NCBI	April 23, 2024

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Salmonella enterica (440524)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Salmonella (590)
Species	Salmonella_enterica (28901)
Strain

Biosample

Curated Collection Information

Accession	40440217

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	South Korea
Original Query Type	name
Coordinates (Lat/Lon)	36.56/127.94
Address	South Korea

ECOSYSTEM

Original Query	Homo sapiens,single cell
Classification	cell_culture,host_associated
Host-associated Taxon	Homo sapiens (9606)

DISEASE

Original Query	None
DOID/SYMP

Visualization

Plasmids from same Biosample

NZ_CP149230.1

Similar Plasmids

based on Mash distance

NZ_CP070911.1	See Comparison
NZ_LR890276.1	See Comparison
NZ_CP041120.1	See Comparison
NZ_OU015333.1	See Comparison
NZ_CP041446.1	See Comparison
NZ_AP025218.1	See Comparison
AP027757.1	See Comparison
NZ_OU015333.1	See Comparison
NZ_CP041446.1	See Comparison
AP027757.1	See Comparison
NZ_CP149273.1	See Comparison
NZ_CP149260.1	See Comparison
NZ_CP149281.1	See Comparison
NZ_AP027763.1	See Comparison
NZ_AP027511.1	See Comparison
NZ_CP070911.1	See Comparison
NZ_LR890276.1	See Comparison
NZ_AP025218.1	See Comparison
NZ_CP041120.1	See Comparison
NZ_CP149281.1	See Comparison
NZ_CP149231.1	See Comparison
NZ_CP149273.1	See Comparison
NZ_CP149260.1	See Comparison
NZ_CP070911.1	See Comparison
NZ_AP025218.1	See Comparison
NZ_OU015333.1	See Comparison
NZ_CP041120.1	See Comparison
NZ_CP149273.1	See Comparison
NZ_CP149260.1	See Comparison
NZ_CP149281.1	See Comparison
NZ_AP027763.1	See Comparison
NZ_AP027511.1	See Comparison
NZ_LR890276.1	See Comparison
NZ_CP041446.1	See Comparison
AP027757.1	See Comparison
NZ_AP027511.1	See Comparison
NZ_OU015333.1	See Comparison
NZ_CP070911.1	See Comparison
NZ_LR890276.1	See Comparison
NZ_AP027763.1	See Comparison
NZ_AP025218.1	See Comparison
NZ_CP041446.1	See Comparison
NZ_CP149273.1	See Comparison
NZ_CP041120.1	See Comparison
AP027757.1	See Comparison
NZ_CP149260.1	See Comparison
NZ_AP027763.1	See Comparison
NZ_CP149281.1	See Comparison
NZ_AP027511.1	See Comparison
NZ_AP025218.1	See Comparison
NZ_CP070911.1	See Comparison
NZ_LR890276.1	See Comparison
NZ_CP041120.1	See Comparison
NZ_OU015333.1	See Comparison
NZ_CP070911.1	See Comparison
AP027757.1	See Comparison
NZ_CP149281.1	See Comparison
NZ_AP027511.1	See Comparison
NZ_CP041446.1	See Comparison
NZ_CP149273.1	See Comparison
NZ_CP149260.1	See Comparison
NZ_AP027763.1	See Comparison
NZ_CP041446.1	See Comparison
NZ_AP025218.1	See Comparison
NZ_LR890276.1	See Comparison
NZ_OU015333.1	See Comparison
NZ_CP149273.1	See Comparison
NZ_CP041120.1	See Comparison
AP027757.1	See Comparison
NZ_CP149260.1	See Comparison
NZ_AP027763.1	See Comparison
NZ_CP149281.1	See Comparison
NZ_AP027511.1	See Comparison

Identical Plasmids

100% Sequence Identity

NZ_CP149260.1

Sequence

Accession: NZ_CP149260.1
Description: Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain Z1322HSL0042 plasmid pZ1322HSL0042-4, complete sequence
Source: refseq
Created at NCBI: April 23, 2024

Host Taxonomy

Assigned Host: Salmonella enterica (440524)

Superkingdom : Bacteria (2)
Phylum : Pseudomonadota (1224)
Class : Gammaproteobacteria (1236)
Order : Enterobacterales (91347)
Family : Enterobacteriaceae (543)
Genus : Salmonella (590)
Species : Salmonella_enterica (28901)
Strain:

Biosample

Accession: 40440209

GEOGRAPHICAL INFORMATION

Original Query: South Korea
Original Query Type: name
Address: South Korea
Coordinates (Lat/Lon): 36.56/127.94

ECOSYSTEM

Original Query: Homo sapiens,single cell
Classification: cell_culture,host_associated
Host-associated Taxon:
- Homo sapiens (9606)

Visualization

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore