Plasmid NZ_CP140480.1

Sequence

Nucleotide Information

Accession NZ_CP140480.1
Description Klebsiella pneumoniae subsp. pneumoniae strain FF29-001BS plasmid ColpVC, complete sequence
Source refseq
Topology circular
Length 2050 bp
GC Content 0.56 %
Created at NCBI Jan. 9, 2024



Biosample

Curated Collection Information
Accession 38451788

PLASMID INFORMATION
Genotype ST437

GEOGRAPHICAL INFORMATION
Original Query 6.8165S;39.2894E
Original Query Type coordinates
Coordinates (Lat/Lon) -6.82/39.29
Address Askari Centre, 3, Azikiwe Road, City Centre, Kisutu, Ilala Municipal, Dar es-Salaam, Coastal Zone, 11107, Tanzania

ECOSYSTEM
Original Query Homo sapiens,blood
Classification blood,circulatory_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query bloodstream infection
DOID/SYMP
  • Disease infectious agent (DOID:0050117 )
    • A disease that is the consequence of the presence of pathogenic microbial agents, including pathogenic viruses, pathogenic bacteria, fungi, protozoa, multicellular parasites, and aberrant proteins known as prions.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

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NZ_CP034962.1 See Comparison
NZ_CP034052.1 See Comparison
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NZ_CP138792.1 See Comparison
NZ_CP137398.1 See Comparison
NZ_CP110166.1 See Comparison
NZ_CP110159.1 See Comparison
NZ_CP126046.1 See Comparison
NZ_CP136459.1 See Comparison
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NZ_KU302803.1 See Comparison
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CP052398.1 See Comparison
CP052285.1 See Comparison
NZ_CP070160.1 See Comparison
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OW968222.1 See Comparison
NZ_CP102761.1 See Comparison
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NZ_CP048396.1 See Comparison
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OW968395.1 See Comparison
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OW968371.1 See Comparison
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OW968273.1 See Comparison
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OW849387.1 See Comparison
OW849091.1 See Comparison
OW849058.1 See Comparison
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NZ_CP034962.1 See Comparison
NZ_CP034052.1 See Comparison
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NZ_CP138792.1 See Comparison
NZ_CP137398.1 See Comparison
NZ_CP110166.1 See Comparison
NZ_CP110159.1 See Comparison
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NZ_CP136459.1 See Comparison
NZ_CP126046.1 See Comparison
CP052426.1 See Comparison
CP052314.1 See Comparison
CP052398.1 See Comparison
CP052285.1 See Comparison
NZ_CP100124.1 See Comparison
NZ_CP070160.1 See Comparison
NZ_CP113185.1 See Comparison
OW959924.1 See Comparison
OW969924.1 See Comparison
NZ_CP102761.1 See Comparison
OX030757.1 See Comparison
OX030725.1 See Comparison
OX030715.1 See Comparison
NZ_CP048396.1 See Comparison
OW968466.1 See Comparison
OW968222.1 See Comparison
OW969846.1 See Comparison
OW968395.1 See Comparison
OW968380.1 See Comparison
OW968371.1 See Comparison
OW849275.1 See Comparison
OW968357.1 See Comparison
OW968273.1 See Comparison
OW966943.1 See Comparison
OW848892.1 See Comparison
OW848885.1 See Comparison
OW848801.1 See Comparison
OW849387.1 See Comparison
OW849300.1 See Comparison
OW635556.1 See Comparison
OW849058.1 See Comparison
OW849091.1 See Comparison
CP067591.1 See Comparison
CP067865.1 See Comparison
CP067842.1 See Comparison
NZ_CP058785.1 See Comparison
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NZ_CP034052.1 See Comparison
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NZ_CP110166.1 See Comparison
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NZ_CP138792.1 See Comparison
NZ_CP137398.1 See Comparison
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CP052314.1 See Comparison
CP052398.1 See Comparison
CP052285.1 See Comparison
OW969924.1 See Comparison
NZ_CP070160.1 See Comparison
NZ_CP113185.1 See Comparison
NZ_CP100124.1 See Comparison
NZ_CP102761.1 See Comparison
OX030757.1 See Comparison
OX030725.1 See Comparison
OX030715.1 See Comparison
NZ_CP048396.1 See Comparison
OW969846.1 See Comparison
OW959924.1 See Comparison
OW968395.1 See Comparison
OW968380.1 See Comparison
OW968371.1 See Comparison
OW968357.1 See Comparison
OW968466.1 See Comparison
OW968273.1 See Comparison
OW968222.1 See Comparison
OW966943.1 See Comparison
OW848892.1 See Comparison
OW848885.1 See Comparison
OW848801.1 See Comparison
OW849387.1 See Comparison
OW849091.1 See Comparison
OW849300.1 See Comparison
OW849275.1 See Comparison
OW849058.1 See Comparison
NZ_CP058785.1 See Comparison
OW635556.1 See Comparison
CP067520.1 See Comparison
CP067865.1 See Comparison
CP067842.1 See Comparison
CP067515.1 See Comparison
NZ_CP034052.1 See Comparison
NZ_CP055193.1 See Comparison
NZ_CP034962.1 See Comparison
CP067591.1 See Comparison
CP067583.1 See Comparison
NZ_CP110166.1 See Comparison
NZ_CP029139.1 See Comparison
NZ_CP138801.1 See Comparison
NZ_CP138792.1 See Comparison
NZ_CP137398.1 See Comparison
NZ_CP110159.1 See Comparison
NZ_CP070160.1 See Comparison
CP052314.1 See Comparison
NZ_CP136459.1 See Comparison
NZ_CP126046.1 See Comparison
NZ_KU302803.1 See Comparison
CP052426.1 See Comparison
CP052398.1 See Comparison
CP052285.1 See Comparison
NZ_CP100124.1 See Comparison
NZ_CP113185.1 See Comparison
NZ_CP048396.1 See Comparison
NZ_CP102761.1 See Comparison
OX030757.1 See Comparison
OX030725.1 See Comparison
OX030715.1 See Comparison
OW969924.1 See Comparison
OW959924.1 See Comparison
OW969846.1 See Comparison
OW968395.1 See Comparison
OW968466.1 See Comparison
OW968380.1 See Comparison
OW968371.1 See Comparison
OW968222.1 See Comparison
OW968357.1 See Comparison
OW968273.1 See Comparison
OW849300.1 See Comparison
OW966943.1 See Comparison
OW848892.1 See Comparison
OW848885.1 See Comparison
OW848801.1 See Comparison
OW849387.1 See Comparison
OW849275.1 See Comparison
OW849058.1 See Comparison
CP067865.1 See Comparison
OW849091.1 See Comparison
OW635556.1 See Comparison
NZ_CP058785.1 See Comparison
CP067842.1 See Comparison
NZ_CP055193.1 See Comparison
CP067520.1 See Comparison
CP067515.1 See Comparison
CP067591.1 See Comparison
CP067583.1 See Comparison
NZ_CP034052.1 See Comparison
NZ_CP034962.1 See Comparison
NZ_CP110166.1 See Comparison
NZ_CP137398.1 See Comparison
NZ_CP029139.1 See Comparison
NZ_CP138801.1 See Comparison
NZ_CP138792.1 See Comparison
NZ_CP110159.1 See Comparison
NZ_CP140480.1 See Comparison
NZ_CP126046.1 See Comparison
NZ_CP136459.1 See Comparison
CP052426.1 See Comparison
NZ_KU302803.1 See Comparison
CP052398.1 See Comparison
CP052314.1 See Comparison
OW959924.1 See Comparison
NZ_CP113185.1 See Comparison
NZ_CP102761.1 See Comparison
NZ_CP048396.1 See Comparison
CP052285.1 See Comparison
NZ_CP070160.1 See Comparison
NZ_CP100124.1 See Comparison
OX030757.1 See Comparison
OX030725.1 See Comparison
OX030715.1 See Comparison
OW969924.1 See Comparison
OW969846.1 See Comparison
OW968466.1 See Comparison
OW968371.1 See Comparison
OW968357.1 See Comparison
OW968395.1 See Comparison
OW968273.1 See Comparison
OW968222.1 See Comparison
OW968380.1 See Comparison
OW966943.1 See Comparison
OW848892.1 See Comparison
OW848885.1 See Comparison
OW848801.1 See Comparison
OW849387.1 See Comparison
OW635556.1 See Comparison
OW849300.1 See Comparison
OW849275.1 See Comparison
OW849091.1 See Comparison
OW849058.1 See Comparison
CP067865.1 See Comparison
CP067842.1 See Comparison
CP067520.1 See Comparison
CP067515.1 See Comparison
NZ_CP055193.1 See Comparison
NZ_CP058785.1 See Comparison
CP067591.1 See Comparison
CP067583.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore