Plasmid NZ_CP138518.1

Sequence

Nucleotide Information

Accession NZ_CP138518.1
Description Klebsiella pneumoniae strain KP3813 plasmid pKP3813-111K, complete sequence
Source refseq
Topology circular
Length 111727 bp
GC Content 0.49 %
Created at NCBI Nov. 21, 2023



Assembly

Genome Data Information

Accession GCF_033807355.1
Assembly Coverage 100


Biosample

Curated Collection Information
Accession 37501193

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query China,Wuhan
Original Query Type name
Coordinates (Lat/Lon) 30.59/114.30
Address China,Wuhan

ECOSYSTEM
Original Query pure culture,urine
Classification cell_culture,host_associated,urinary_system
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP107375.1 See Comparison
NZ_CP107386.1 See Comparison
NZ_CP107337.1 See Comparison
NZ_CP102393.1 See Comparison
NZ_CP146193.1 See Comparison
NZ_CP107375.1 See Comparison
NZ_CP107348.1 See Comparison
NZ_CP107330.1 See Comparison
NZ_CP107323.1 See Comparison
NZ_CP146193.1 See Comparison
NZ_CP107386.1 See Comparison
NZ_CP107348.1 See Comparison
NZ_CP107330.1 See Comparison
NZ_CP107337.1 See Comparison
NZ_CP107323.1 See Comparison
NZ_CP107348.1 See Comparison
NZ_CP102393.1 See Comparison
NZ_CP146193.1 See Comparison
NZ_CP107375.1 See Comparison
NZ_CP107386.1 See Comparison
NZ_CP107323.1 See Comparison
NZ_CP107330.1 See Comparison
NZ_CP107375.1 See Comparison
NZ_CP107337.1 See Comparison
NZ_CP102393.1 See Comparison
NZ_CP146193.1 See Comparison
NZ_CP107386.1 See Comparison
NZ_CP107330.1 See Comparison
NZ_CP107323.1 See Comparison
NZ_CP107348.1 See Comparison
NZ_CP102393.1 See Comparison
NZ_CP107337.1 See Comparison
NZ_CP102393.1 See Comparison
NZ_CP138518.1 See Comparison
NZ_CP107386.1 See Comparison
NZ_CP107330.1 See Comparison
NZ_CP107323.1 See Comparison
NZ_CP146193.1 See Comparison
NZ_CP107375.1 See Comparison
NZ_CP107348.1 See Comparison
NZ_CP107337.1 See Comparison
NZ_CP107348.1 See Comparison
NZ_CP146193.1 See Comparison
NZ_CP107375.1 See Comparison
NZ_CP107386.1 See Comparison
NZ_CP107330.1 See Comparison
NZ_CP107323.1 See Comparison
NZ_CP107337.1 See Comparison
NZ_CP146193.1 See Comparison
NZ_CP102393.1 See Comparison
NZ_CP107375.1 See Comparison
NZ_CP107386.1 See Comparison
NZ_CP107348.1 See Comparison
NZ_CP107323.1 See Comparison
NZ_CP107330.1 See Comparison
NZ_CP107337.1 See Comparison
NZ_CP102393.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2