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v. 2024_05_31_v2
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Typing
Plasmid NZ_CP136829.1
Sequence
Nucleotide Information
Accession
NZ_CP136829.1
Description
Citrobacter koseri strain K2521 plasmid pK2521-2, complete sequence
Source
refseq
Topology
circular
Length
34990 bp
GC Content
0.48 %
Created at NCBI
Oct. 26, 2023
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Citrobacter koseri (545)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Citrobacter (544)
Species
Citrobacter_koseri (545)
Strain
Assembly
Genome Data Information
Accession
GCF_032946055.1
Assembly Coverage
200
Biosample
Curated Collection Information
Accession
37851623
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
29.86N;121.56E
Original Query Type
coordinates
Coordinates (Lat/Lon)
29.86/121.56
Address
Baihe, Yinzhou District, Ningbo, Zhejiang, 315000, China
ECOSYSTEM
Original Query
Homo sapiens
Classification
host_associated
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
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Plasmids from same Biosample
NZ_CP136831.1
NZ_CP136830.1
NZ_CP136827.1
Similar Plasmids
based on Mash distance
NZ_CP089873.1
See Comparison
NZ_CP136834.1
See Comparison
CP128761.1
See Comparison
NZ_CP089873.1
See Comparison
NZ_CP136834.1
See Comparison
CP128761.1
See Comparison
NZ_CP136829.1
See Comparison
NZ_CP136834.1
See Comparison
CP128761.1
See Comparison
NZ_CP089873.1
See Comparison
NZ_CP136834.1
See Comparison
CP128761.1
See Comparison
CP128761.1
See Comparison
NZ_CP089873.1
See Comparison
NZ_CP136834.1
See Comparison
NZ_CP089873.1
See Comparison
NZ_CP136834.1
See Comparison
NZ_CP089873.1
See Comparison
CP128761.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
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Sequence
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NUCCORE ACC
Source
Element Name
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Sequence
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Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore