Plasmid NZ_CP126505.1

Sequence

Nucleotide Information

Accession	NZ_CP126505.1
Description	Escherichia coli strain YZ19MCE28 plasmid pYUYZMC28-MCR, complete sequence
Source	refseq
Topology	circular
Length	62638 bp
GC Content	0.43 %
Created at NCBI	June 5, 2023

Host Taxonomy

According to NCBI Taxonomy

Assigned Host	Escherichia coli (562)

Lineage

Superkingdom	Bacteria (2)
Phylum	Pseudomonadota (1224)
Class	Gammaproteobacteria (1236)
Order	Enterobacterales (91347)
Family	Enterobacteriaceae (543)
Genus	Escherichia (561)
Species	Escherichia_coli (562)
Strain

Biosample

Curated Collection Information

Accession	35222017

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION

Original Query	32.15N;119.1E
Original Query Type	coordinates
Coordinates (Lat/Lon)	32.15/119.10
Address	江乘大道, Baohua, Jurong, Zhenjiang, Jiangsu, 212400, China

ECOSYSTEM

Original Query	chicken meat
Classification	food,meat
Host-associated Taxon

DISEASE

Original Query	None
DOID/SYMP

Visualization

Similar Plasmids

based on Mash distance

NZ_CP080148.1	See Comparison
NZ_CP080136.1	See Comparison
NZ_CP075067.1	See Comparison
NZ_CP021176.1	See Comparison
NZ_CP020548.1	See Comparison
NZ_CP029184.1	See Comparison
NZ_CP126508.1	See Comparison
NZ_CP126503.1	See Comparison
NZ_AP027699.1	See Comparison
NZ_AP027682.1	See Comparison
NZ_AP027711.1	See Comparison
NZ_AP027715.1	See Comparison
NZ_AP027901.1	See Comparison
NZ_AP027675.1	See Comparison
NZ_MN232213.1	See Comparison
NZ_MN232208.1	See Comparison
NZ_MN232204.1	See Comparison
NZ_MN232205.1	See Comparison
NZ_MN232211.1	See Comparison
NZ_MN232210.1	See Comparison
NZ_KY657476.1	See Comparison
NZ_MN232203.1	See Comparison
NZ_MN232198.1	See Comparison
NZ_MN232186.1	See Comparison
NZ_MN232201.1	See Comparison
NZ_MN232196.1	See Comparison
NZ_MN232182.1	See Comparison
NZ_MG825374.1	See Comparison
NZ_CP058303.1	See Comparison
NZ_CP055260.1	See Comparison
NZ_CP061128.1	See Comparison
NZ_KY120365.1	See Comparison
NZ_KY795978.1	See Comparison
NZ_CP047579.1	See Comparison
NZ_CP062982.1	See Comparison
NZ_CP065423.1	See Comparison
NZ_CP029184.1	See Comparison
NZ_LC511662.1	See Comparison
NZ_CP075067.1	See Comparison
NZ_CP021176.1	See Comparison
NZ_MN746292.1	See Comparison
NZ_OM839890.1	See Comparison
NZ_MZ277864.1	See Comparison
NZ_CP080148.1	See Comparison
NZ_CP080136.1	See Comparison
NZ_CP020548.1	See Comparison
NZ_CP020548.1	See Comparison
NZ_CP126508.1	See Comparison
NZ_CP126503.1	See Comparison
NZ_AP027699.1	See Comparison
NZ_AP027682.1	See Comparison
NZ_AP027711.1	See Comparison
NZ_AP027715.1	See Comparison
NZ_AP027901.1	See Comparison
NZ_AP027675.1	See Comparison
NZ_MN232213.1	See Comparison
NZ_MN232208.1	See Comparison
NZ_MN232204.1	See Comparison
NZ_MN232205.1	See Comparison
NZ_MN232211.1	See Comparison
NZ_MN232210.1	See Comparison
NZ_KY657476.1	See Comparison
NZ_MN232203.1	See Comparison
NZ_MN232198.1	See Comparison
NZ_MN232186.1	See Comparison
NZ_MN232201.1	See Comparison
NZ_MN232196.1	See Comparison
NZ_MN232182.1	See Comparison
NZ_CP058303.1	See Comparison
NZ_CP055260.1	See Comparison
NZ_KY120365.1	See Comparison
NZ_CP065423.1	See Comparison
NZ_MN746292.1	See Comparison
NZ_MZ277864.1	See Comparison
NZ_CP080148.1	See Comparison
NZ_CP080136.1	See Comparison
NZ_CP021176.1	See Comparison
NZ_MG825374.1	See Comparison
NZ_KY795978.1	See Comparison
NZ_CP047579.1	See Comparison
NZ_CP061128.1	See Comparison
NZ_CP062982.1	See Comparison
NZ_LC511662.1	See Comparison
NZ_OM839890.1	See Comparison
NZ_CP075067.1	See Comparison
NZ_CP029184.1	See Comparison
NZ_KY795978.1	See Comparison
NZ_CP126508.1	See Comparison
NZ_CP126503.1	See Comparison
NZ_AP027711.1	See Comparison
NZ_AP027715.1	See Comparison
NZ_AP027901.1	See Comparison
NZ_AP027675.1	See Comparison
NZ_MN232208.1	See Comparison
NZ_MN232204.1	See Comparison
NZ_MN232205.1	See Comparison
NZ_MN232211.1	See Comparison
NZ_MN232210.1	See Comparison
NZ_KY657476.1	See Comparison
NZ_MN232203.1	See Comparison
NZ_MN232198.1	See Comparison
NZ_MN232186.1	See Comparison
NZ_MN232201.1	See Comparison
NZ_MN232196.1	See Comparison
NZ_MN232182.1	See Comparison
NZ_AP027699.1	See Comparison
NZ_AP027682.1	See Comparison
NZ_MN232213.1	See Comparison
NZ_CP058303.1	See Comparison
NZ_CP055260.1	See Comparison
NZ_MG825374.1	See Comparison
NZ_CP065423.1	See Comparison
NZ_KY120365.1	See Comparison
NZ_CP047579.1	See Comparison
NZ_CP061128.1	See Comparison
NZ_CP075067.1	See Comparison
NZ_LC511662.1	See Comparison
NZ_OM839890.1	See Comparison
NZ_CP080148.1	See Comparison
NZ_CP080136.1	See Comparison
NZ_CP062982.1	See Comparison
NZ_MN746292.1	See Comparison
NZ_MZ277864.1	See Comparison
NZ_CP029184.1	See Comparison
NZ_CP021176.1	See Comparison
NZ_CP020548.1	See Comparison
NZ_CP126508.1	See Comparison
NZ_CP126503.1	See Comparison
NZ_KY795978.1	See Comparison
NZ_AP027715.1	See Comparison
NZ_AP027901.1	See Comparison
NZ_AP027675.1	See Comparison
NZ_MN232213.1	See Comparison
NZ_MN232208.1	See Comparison
NZ_MN232204.1	See Comparison
NZ_CP058303.1	See Comparison
NZ_CP055260.1	See Comparison
NZ_AP027699.1	See Comparison
NZ_AP027682.1	See Comparison
NZ_AP027711.1	See Comparison
NZ_MN232205.1	See Comparison
NZ_MN232211.1	See Comparison
NZ_MN232210.1	See Comparison
NZ_KY657476.1	See Comparison
NZ_MN232203.1	See Comparison
NZ_MN232198.1	See Comparison
NZ_MN232186.1	See Comparison
NZ_MN232201.1	See Comparison
NZ_MN232196.1	See Comparison
NZ_MN232182.1	See Comparison
NZ_MG825374.1	See Comparison
NZ_CP062982.1	See Comparison
NZ_KY120365.1	See Comparison
NZ_CP047579.1	See Comparison
NZ_CP065423.1	See Comparison
NZ_CP061128.1	See Comparison
NZ_LC511662.1	See Comparison
NZ_MN746292.1	See Comparison
NZ_OM839890.1	See Comparison
NZ_CP080148.1	See Comparison
NZ_MZ277864.1	See Comparison
NZ_CP080136.1	See Comparison
NZ_CP075067.1	See Comparison
NZ_CP021176.1	See Comparison
NZ_AP027675.1	See Comparison
NZ_CP126508.1	See Comparison
NZ_CP126505.1	See Comparison
NZ_CP126503.1	See Comparison
NZ_CP020548.1	See Comparison
NZ_CP029184.1	See Comparison
NZ_MN232203.1	See Comparison
NZ_AP027699.1	See Comparison
NZ_AP027682.1	See Comparison
NZ_AP027711.1	See Comparison
NZ_AP027715.1	See Comparison
NZ_AP027901.1	See Comparison
NZ_MN232198.1	See Comparison
NZ_MN232186.1	See Comparison
NZ_MN232201.1	See Comparison
NZ_MN232196.1	See Comparison
NZ_MN232182.1	See Comparison
NZ_CP055260.1	See Comparison
NZ_MN232213.1	See Comparison
NZ_MN232208.1	See Comparison
NZ_MN232204.1	See Comparison
NZ_MN232205.1	See Comparison
NZ_MN232211.1	See Comparison
NZ_MN232210.1	See Comparison
NZ_KY657476.1	See Comparison
NZ_CP058303.1	See Comparison
NZ_MG825374.1	See Comparison
NZ_KY120365.1	See Comparison
NZ_KY795978.1	See Comparison
NZ_CP047579.1	See Comparison
NZ_CP062982.1	See Comparison
NZ_CP065423.1	See Comparison
NZ_CP061128.1	See Comparison
NZ_MN746292.1	See Comparison
NZ_LC511662.1	See Comparison
NZ_MZ277864.1	See Comparison
NZ_OM839890.1	See Comparison
NZ_CP021176.1	See Comparison
NZ_CP075067.1	See Comparison
NZ_CP080148.1	See Comparison
NZ_CP080136.1	See Comparison
NZ_CP020548.1	See Comparison
NZ_CP029184.1	See Comparison
NZ_CP126508.1	See Comparison
NZ_CP126503.1	See Comparison
NZ_AP027699.1	See Comparison
NZ_AP027682.1	See Comparison
NZ_AP027711.1	See Comparison
NZ_AP027715.1	See Comparison
NZ_AP027901.1	See Comparison
NZ_AP027675.1	See Comparison
NZ_MN232213.1	See Comparison
NZ_MN232208.1	See Comparison
NZ_MN232204.1	See Comparison
NZ_MN232205.1	See Comparison
NZ_MN232211.1	See Comparison
NZ_MN232210.1	See Comparison
NZ_KY657476.1	See Comparison
NZ_MN232201.1	See Comparison
NZ_MN232196.1	See Comparison
NZ_MN232182.1	See Comparison
NZ_MN232203.1	See Comparison
NZ_MN232198.1	See Comparison
NZ_MN232186.1	See Comparison
NZ_CP058303.1	See Comparison
NZ_CP062982.1	See Comparison
NZ_KY795978.1	See Comparison
NZ_CP055260.1	See Comparison
NZ_MG825374.1	See Comparison
NZ_KY120365.1	See Comparison
NZ_CP047579.1	See Comparison
NZ_CP065423.1	See Comparison
NZ_CP061128.1	See Comparison
NZ_MZ277864.1	See Comparison
NZ_MN746292.1	See Comparison
NZ_LC511662.1	See Comparison
NZ_OM839890.1	See Comparison

Plasmid Visualization

NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite
NUCCORE ACC	Source	Element Name	Display	Sequence	Favorite

Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process
NUCCORE ACC	Gene	Locus Tag	Product	Protein id	Codon Start	Translation Table	GO process

Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)
NUCCORE ACC	Analysis Software Name	Reference Database Version	Gene Symbol	Gene Name	Drug Class	Antimicrobial Agent	Gene Start	Gene Stop	Gene Length	Strand Orientation	Sequence Identity (%)	Coverage (%)

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)

NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)
NUCCORE ACC	Contigs	md5 hash	Replicon Type	Relaxase Type	MPF Type	OriT Type	Predicted Mobility	Primary Cluster ID	Secondary Cluster ID	Observed Host Range Ncbi Rank	Observed Host Range Ncbi Name	Mash Nearest Neighbor	Mash Neighbor Distance	Mash Neighbor Identification	Reported Host Range Lit Rank	Reported Host Range Lit Name	Replicon Type Accession	Relaxase Type Accession	MPF Type Accession	OriT Type Accession	Associated PMID(s)

BLAST results of detected typing markers by MOB-type

NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore
NUCCORE ACC	biomarker	MOB-suite ID	Element	Start	End	Strand	Identity	Coverage	Evalue	Bitscore