Plasmid NZ_CP119115.1

Sequence

Nucleotide Information

Accession NZ_CP119115.1
Description Staphylococcus aureus strain GENOMIC22-002 plasmid pCFSAN126947_02, complete sequence
Source refseq
Topology circular
Length 4971 bp
GC Content 0.27 %
Created at NCBI March 10, 2023



Assembly

Genome Data Information

Accession GCF_029094145.1
Assembly Coverage 700


Biosample

Curated Collection Information
Accession 33425966

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Denmark
Original Query Type name
Coordinates (Lat/Lon) 56.21/9.30
Address Denmark

ECOSYSTEM
Original Query EQA test strain
Classification None
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP119115.1 See Comparison


Plasmid Visualization

JSON GENBANK

SourceElement Name Display Sequence Favorite
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Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACCReplicon TypeRelaxase TypeMPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi NameMash Neighbor DistanceReported Host Range Lit Rank
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NUCCORE ACCReplicon TypeRelaxase TypeMPF TypeOriT TypePredicted MobilityPrimary Cluster IDSecondary Cluster IDObserved Host Range Ncbi NameMash Neighbor DistanceReported Host Range Lit Rank




BLAST results of detected typing markers by MOB-type
biomarkerMOB-suite IDElementStartEndStrandIdentityCoverageEvalueBitscore
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biomarkerMOB-suite IDElementStartEndStrandIdentityCoverageEvalueBitscore
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Detected typing markers by plasmidfinder
NUCCORE ACCTypingIdentityCoverageStartEndStrandOrganism L1Organism L2
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NUCCORE ACCTypingIdentityCoverageStartEndStrandOrganism L1Organism L2