Plasmid NZ_CP104402.1

Sequence

Nucleotide Information

Accession NZ_CP104402.1
Description Enterobacter hormaechei subsp. steigerwaltii strain colR plasmid pEH4236, complete sequence
Source refseq
Topology circular
Length 110892 bp
GC Content 0.51 %
Created at NCBI Sept. 22, 2022



Assembly

Genome Data Information

Accession GCF_025311535.1
Assembly Coverage 727


Biosample

Curated Collection Information
Accession 30695413

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 53.1325N;23.1688E
Original Query Type coordinates
Coordinates (Lat/Lon) 53.13/23.17
Address 29, Aleja Józefa Piłsudskiego, Osiedle Bojary-Chopina, Bojary, Białystok, Podlaskie Voivodeship, 15-064, Poland

ECOSYSTEM
Original Query Homo sapiens
Classification host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON




Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore