Plasmid NZ_CP103497.1

Sequence

Nucleotide Information

Accession NZ_CP103497.1
Description Enterobacter hormaechei strain 70 plasmid pMB9539_3, complete sequence
Source refseq
Topology circular
Length 4760 bp
GC Content 0.52 %
Created at NCBI Sept. 6, 2022



Assembly

Genome Data Information

Accession GCF_024917775.1
Assembly Coverage 163


Biosample

Curated Collection Information
Accession 28173982

PLASMID INFORMATION
Genotype ST106

GEOGRAPHICAL INFORMATION
Original Query 29.7068N;95.3971W
Original Query Type coordinates
Coordinates (Lat/Lon) 29.71/-95.40
Address University of Texas MD Anderson Cancer Center, 1515, Holcombe Boulevard, Texas Medical Center, Houston, Harris County, Texas, 77030, United States

ECOSYSTEM
Original Query Homo sapiens,blood
Classification blood,circulatory_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query Bacteremia
DOID/SYMP
  • Bacterial infectious disease (DOID:104 )
    • A disease by infectious agent that results_in infection, has_material_basis_in Bacteria.
    • Has_material_basis_in: ['bacteria']

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

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NZ_AP025873.1 See Comparison
NZ_AP025865.1 See Comparison
NZ_AP025853.1 See Comparison
NZ_AP025893.1 See Comparison
NZ_AP025869.1 See Comparison
NZ_AP025913.1 See Comparison
NZ_AP025849.1 See Comparison
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NZ_AP025885.1 See Comparison
NZ_AP025909.1 See Comparison
NZ_AP025925.1 See Comparison
NZ_AP025889.1 See Comparison
NZ_AP025861.1 See Comparison
NZ_AP025877.1 See Comparison
NZ_AP025897.1 See Comparison
NZ_AP025857.1 See Comparison
OW968089.1 See Comparison
NZ_AP025921.1 See Comparison
NZ_AP025881.1 See Comparison
NZ_AP025901.1 See Comparison
NZ_AP025934.1 See Comparison
NZ_AP025873.1 See Comparison
NZ_AP025865.1 See Comparison
NZ_AP025853.1 See Comparison
NZ_AP025893.1 See Comparison
NZ_AP025869.1 See Comparison
NZ_AP025913.1 See Comparison
NZ_AP025849.1 See Comparison
NZ_AP025929.1 See Comparison
NZ_AP025885.1 See Comparison
NZ_AP025909.1 See Comparison
NZ_AP025925.1 See Comparison
NZ_AP025889.1 See Comparison
NZ_AP025861.1 See Comparison
NZ_AP025905.1 See Comparison
NZ_CP126765.1 See Comparison
NZ_CP042554.1 See Comparison
NZ_CP126771.1 See Comparison
NZ_CP042554.1 See Comparison
NZ_CP147670.1 See Comparison
NZ_AP025857.1 See Comparison
NZ_AP025921.1 See Comparison
NZ_AP025881.1 See Comparison
NZ_AP025901.1 See Comparison
NZ_AP025934.1 See Comparison
NZ_AP025873.1 See Comparison
NZ_AP025865.1 See Comparison
NZ_AP025853.1 See Comparison
NZ_AP025893.1 See Comparison
NZ_AP025869.1 See Comparison
NZ_AP025913.1 See Comparison
NZ_AP025849.1 See Comparison
NZ_AP025929.1 See Comparison
NZ_AP025885.1 See Comparison
NZ_AP025909.1 See Comparison
NZ_AP025925.1 See Comparison
NZ_AP025889.1 See Comparison
NZ_AP025861.1 See Comparison
NZ_AP025905.1 See Comparison
NZ_AP025917.1 See Comparison
NZ_AP025877.1 See Comparison
NZ_AP025897.1 See Comparison
OW968089.1 See Comparison
NZ_CP115007.1 See Comparison
NZ_CP126771.1 See Comparison
NZ_CP115007.1 See Comparison
NZ_CP147670.1 See Comparison
NZ_CP126765.1 See Comparison
NZ_AP025857.1 See Comparison
NZ_AP025921.1 See Comparison
NZ_AP025881.1 See Comparison
NZ_AP025901.1 See Comparison
NZ_AP025934.1 See Comparison
NZ_AP025873.1 See Comparison
NZ_AP025865.1 See Comparison
NZ_AP025853.1 See Comparison
NZ_AP025893.1 See Comparison
NZ_AP025869.1 See Comparison
NZ_AP025913.1 See Comparison
NZ_AP025849.1 See Comparison
NZ_AP025929.1 See Comparison
NZ_AP025885.1 See Comparison
NZ_AP025909.1 See Comparison
NZ_AP025925.1 See Comparison
NZ_AP025889.1 See Comparison
NZ_AP025861.1 See Comparison
NZ_AP025905.1 See Comparison
NZ_AP025917.1 See Comparison
NZ_AP025877.1 See Comparison
NZ_AP025897.1 See Comparison
NZ_CP042554.1 See Comparison
OW968089.1 See Comparison
NZ_CP115007.1 See Comparison
NZ_CP126765.1 See Comparison
NZ_CP126771.1 See Comparison
NZ_CP103497.1 See Comparison
NZ_CP147670.1 See Comparison
NZ_AP025857.1 See Comparison
NZ_AP025921.1 See Comparison
NZ_AP025881.1 See Comparison
NZ_AP025893.1 See Comparison
NZ_AP025901.1 See Comparison
NZ_AP025869.1 See Comparison
NZ_AP025934.1 See Comparison
NZ_AP025913.1 See Comparison
NZ_AP025873.1 See Comparison
NZ_AP025849.1 See Comparison
NZ_AP025929.1 See Comparison
NZ_AP025865.1 See Comparison
NZ_AP025853.1 See Comparison
NZ_AP025885.1 See Comparison
NZ_AP025909.1 See Comparison
NZ_AP025925.1 See Comparison
NZ_CP042554.1 See Comparison
NZ_AP025889.1 See Comparison
NZ_AP025861.1 See Comparison
NZ_AP025905.1 See Comparison
NZ_AP025917.1 See Comparison
NZ_AP025877.1 See Comparison
NZ_AP025897.1 See Comparison
OW968089.1 See Comparison
NZ_CP147670.1 See Comparison
NZ_CP126765.1 See Comparison
NZ_CP126771.1 See Comparison
NZ_CP115007.1 See Comparison
NZ_AP025893.1 See Comparison
NZ_AP025869.1 See Comparison
NZ_AP025913.1 See Comparison
NZ_AP025849.1 See Comparison
NZ_AP025929.1 See Comparison
NZ_AP025885.1 See Comparison
NZ_AP025909.1 See Comparison
NZ_AP025925.1 See Comparison
NZ_AP025889.1 See Comparison
NZ_AP025861.1 See Comparison
NZ_AP025905.1 See Comparison
NZ_AP025917.1 See Comparison
NZ_AP025877.1 See Comparison
NZ_AP025897.1 See Comparison
OW968089.1 See Comparison
NZ_AP025857.1 See Comparison
NZ_AP025921.1 See Comparison
NZ_AP025881.1 See Comparison
NZ_AP025901.1 See Comparison
NZ_AP025934.1 See Comparison
NZ_AP025873.1 See Comparison
NZ_AP025865.1 See Comparison
NZ_AP025853.1 See Comparison
NZ_CP042554.1 See Comparison
NZ_CP115007.1 See Comparison
NZ_CP126765.1 See Comparison
NZ_CP126771.1 See Comparison
NZ_CP147670.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore