Plasmid NZ_CP098155.1

Sequence

Nucleotide Information

Accession NZ_CP098155.1
Description Klebsiella pneumoniae strain Z0117KP0017 plasmid pZ0117KP0017-1, complete sequence
Source refseq
Topology circular
Length 298973 bp
GC Content 0.47 %
Created at NCBI June 9, 2022



Assembly

Genome Data Information

Accession GCF_023657775.1
Assembly Coverage 117


Biosample

Curated Collection Information
Accession 28703766

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query South Korea
Original Query Type name
Coordinates (Lat/Lon) 36.56/127.94
Address South Korea

ECOSYSTEM
Original Query Canis lupus familiaris,Rectal swab
Classification gastrointestinal_system,host_associated,rectal
Host-associated Taxon
  • Canis lupus (9615)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_OL331021.1 See Comparison
NZ_OL331019.1 See Comparison
NZ_CP083621.1 See Comparison
NZ_CP083644.1 See Comparison
NZ_CP083642.1 See Comparison
NZ_CP077207.1 See Comparison
NC_024983.1 See Comparison
NZ_CP024813.1 See Comparison
NZ_CP098152.1 See Comparison
NZ_MG878867.1 See Comparison
NZ_LN794248.1 See Comparison
NZ_LN830952.1 See Comparison
NZ_MN540571.1 See Comparison
NZ_MK736669.1 See Comparison
NZ_CP061495.1 See Comparison
NZ_CP083621.1 See Comparison
OW849484.1 See Comparison
NZ_OL331019.1 See Comparison
OW969716.1 See Comparison
OW968297.1 See Comparison
NZ_OL331021.1 See Comparison
NZ_CP083644.1 See Comparison
NZ_CP083642.1 See Comparison
NZ_CP077207.1 See Comparison
NZ_CP083621.1 See Comparison
NZ_LN830952.1 See Comparison
NZ_MK736669.1 See Comparison
NZ_MG878867.1 See Comparison
NZ_CP098155.1 See Comparison
NZ_CP098152.1 See Comparison
OW969716.1 See Comparison
OW968297.1 See Comparison
NC_024983.1 See Comparison
NZ_CP024813.1 See Comparison
NZ_LN794248.1 See Comparison
NZ_MN540571.1 See Comparison
NZ_CP061495.1 See Comparison
OW849484.1 See Comparison
NZ_OL331021.1 See Comparison
NZ_OL331019.1 See Comparison
NZ_CP083644.1 See Comparison
NZ_CP083642.1 See Comparison
NZ_CP077207.1 See Comparison
NC_024983.1 See Comparison
NZ_LN794248.1 See Comparison
NZ_CP024813.1 See Comparison
NZ_MK736669.1 See Comparison
NZ_LN830952.1 See Comparison
NZ_MN540571.1 See Comparison
NZ_CP061495.1 See Comparison
NZ_MG878867.1 See Comparison
OW849484.1 See Comparison
NZ_CP098152.1 See Comparison
OW969716.1 See Comparison
OW968297.1 See Comparison
NC_024983.1 See Comparison
NZ_OL331021.1 See Comparison
NZ_OL331019.1 See Comparison
NZ_CP077207.1 See Comparison
NZ_CP083621.1 See Comparison
NZ_CP083644.1 See Comparison
NZ_CP083642.1 See Comparison
NZ_MK736669.1 See Comparison
NZ_CP024813.1 See Comparison
NZ_LN794248.1 See Comparison
NZ_LN830952.1 See Comparison
NZ_MN540571.1 See Comparison
NZ_OL331019.1 See Comparison
NZ_MG878867.1 See Comparison
NZ_CP098152.1 See Comparison
OW849484.1 See Comparison
NZ_CP061495.1 See Comparison
OW969716.1 See Comparison
OW968297.1 See Comparison
NZ_OL331021.1 See Comparison
NZ_CP083621.1 See Comparison
NZ_CP083644.1 See Comparison
NZ_CP083642.1 See Comparison
NC_024983.1 See Comparison
NZ_CP077207.1 See Comparison
NZ_LN794248.1 See Comparison
NZ_CP024813.1 See Comparison
NZ_MN540571.1 See Comparison
NZ_MG878867.1 See Comparison
NZ_LN830952.1 See Comparison
NZ_MK736669.1 See Comparison
OW968297.1 See Comparison
NZ_CP061495.1 See Comparison
NZ_CP098152.1 See Comparison
OW969716.1 See Comparison
OW849484.1 See Comparison
NZ_OL331019.1 See Comparison
NZ_OL331021.1 See Comparison
NZ_CP077207.1 See Comparison
NZ_CP083621.1 See Comparison
NZ_CP083644.1 See Comparison
NZ_CP083642.1 See Comparison
NC_024983.1 See Comparison
NZ_CP061495.1 See Comparison
NZ_CP024813.1 See Comparison
NZ_MG878867.1 See Comparison
NZ_LN794248.1 See Comparison
NZ_LN830952.1 See Comparison
NZ_MN540571.1 See Comparison
NZ_MK736669.1 See Comparison
OW969716.1 See Comparison
OW968297.1 See Comparison
OW849484.1 See Comparison
NZ_CP098152.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore