Plasmid NZ_CP089019.1

Sequence

Nucleotide Information

Accession NZ_CP089019.1
Description Klebsiella pneumoniae strain 53374 plasmid p53374-177.1, complete sequence
Source refseq
Topology circular
Length 177113 bp
GC Content 0.52 %
Created at NCBI Dec. 14, 2021



Assembly

Genome Data Information

Accession GCF_021166195.1
Assembly Coverage 100


Biosample

Curated Collection Information
Accession 23552366

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Taiwan
Original Query Type name
Coordinates (Lat/Lon) 23.60/120.84
Address Taiwan

ECOSYSTEM
Original Query Homo sapiens
Classification host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

CP027695.1 See Comparison
NZ_CP028996.1 See Comparison
NZ_CP133877.1 See Comparison
NZ_CP065118.1 See Comparison
NZ_CP129729.1 See Comparison
NZ_CP129782.1 See Comparison
NZ_CP129719.1 See Comparison
NZ_CP129738.1 See Comparison
NZ_CP129787.1 See Comparison
NZ_CP129760.1 See Comparison
NZ_CP129722.1 See Comparison
NZ_CP129778.1 See Comparison
NZ_CP122581.1 See Comparison
NZ_CP122569.1 See Comparison
NZ_CP131908.1 See Comparison
NZ_CP131702.1 See Comparison
NZ_CP131681.1 See Comparison
NZ_CP144317.1 See Comparison
NZ_CP142989.1 See Comparison
NZ_MF150118.1 See Comparison
NZ_CP065454.1 See Comparison
CP052444.1 See Comparison
NZ_CP040034.1 See Comparison
NZ_CP040029.1 See Comparison
NZ_CP065118.1 See Comparison
NZ_CP028996.1 See Comparison
NZ_CP133877.1 See Comparison
CP027695.1 See Comparison
NZ_CP129782.1 See Comparison
NZ_CP129719.1 See Comparison
NZ_CP129738.1 See Comparison
NZ_CP129778.1 See Comparison
NZ_CP129787.1 See Comparison
NZ_CP129729.1 See Comparison
NZ_CP129760.1 See Comparison
NZ_CP129722.1 See Comparison
NZ_CP131681.1 See Comparison
NZ_CP122581.1 See Comparison
NZ_CP122569.1 See Comparison
NZ_CP142989.1 See Comparison
NZ_CP131908.1 See Comparison
NZ_CP131702.1 See Comparison
NZ_CP144317.1 See Comparison
CP052444.1 See Comparison
NZ_MF150118.1 See Comparison
NZ_CP040034.1 See Comparison
NZ_CP040029.1 See Comparison
NZ_CP065454.1 See Comparison
NZ_CP028996.1 See Comparison
CP027695.1 See Comparison
NZ_CP133877.1 See Comparison
NZ_CP129778.1 See Comparison
NZ_CP065118.1 See Comparison
NZ_CP129782.1 See Comparison
NZ_CP129719.1 See Comparison
NZ_CP129738.1 See Comparison
NZ_CP129787.1 See Comparison
NZ_CP129760.1 See Comparison
NZ_CP122581.1 See Comparison
NZ_CP129722.1 See Comparison
NZ_CP129729.1 See Comparison
NZ_CP122569.1 See Comparison
NZ_CP131681.1 See Comparison
NZ_CP131908.1 See Comparison
NZ_CP131702.1 See Comparison
CP027695.1 See Comparison
NZ_CP144317.1 See Comparison
NZ_MF150118.1 See Comparison
CP052444.1 See Comparison
NZ_CP040034.1 See Comparison
NZ_CP040029.1 See Comparison
NZ_CP142989.1 See Comparison
NZ_CP065454.1 See Comparison
NZ_CP129729.1 See Comparison
NZ_CP028996.1 See Comparison
NZ_CP133877.1 See Comparison
NZ_CP129719.1 See Comparison
NZ_CP129738.1 See Comparison
NZ_CP065118.1 See Comparison
NZ_CP129782.1 See Comparison
NZ_CP129787.1 See Comparison
NZ_CP129760.1 See Comparison
NZ_CP122581.1 See Comparison
NZ_CP129722.1 See Comparison
NZ_CP129778.1 See Comparison
NZ_CP122569.1 See Comparison
NZ_CP131702.1 See Comparison
NZ_CP131681.1 See Comparison
NZ_CP144317.1 See Comparison
NZ_CP131908.1 See Comparison
NZ_MF150118.1 See Comparison
NZ_CP142989.1 See Comparison
CP052444.1 See Comparison
NZ_CP040034.1 See Comparison
NZ_CP040029.1 See Comparison
NZ_CP089019.1 See Comparison
NZ_CP065454.1 See Comparison
CP027695.1 See Comparison
NZ_CP129787.1 See Comparison
NZ_CP065118.1 See Comparison
NZ_CP028996.1 See Comparison
NZ_CP133877.1 See Comparison
NZ_CP129760.1 See Comparison
NZ_CP129722.1 See Comparison
NZ_CP129729.1 See Comparison
NZ_CP129778.1 See Comparison
NZ_CP129782.1 See Comparison
NZ_CP129719.1 See Comparison
NZ_CP129738.1 See Comparison
NZ_MF150118.1 See Comparison
NZ_CP122581.1 See Comparison
NZ_CP122569.1 See Comparison
NZ_CP131908.1 See Comparison
NZ_CP131702.1 See Comparison
NZ_CP131681.1 See Comparison
NZ_CP142989.1 See Comparison
NZ_CP144317.1 See Comparison
CP052444.1 See Comparison
NZ_CP028996.1 See Comparison
NZ_CP040034.1 See Comparison
NZ_CP040029.1 See Comparison
CP027695.1 See Comparison
NZ_CP065454.1 See Comparison
NZ_CP144317.1 See Comparison
NZ_CP065118.1 See Comparison
NZ_CP129729.1 See Comparison
NZ_CP129782.1 See Comparison
NZ_CP129719.1 See Comparison
NZ_CP129738.1 See Comparison
NZ_CP129787.1 See Comparison
NZ_CP122581.1 See Comparison
NZ_CP122569.1 See Comparison
NZ_CP133877.1 See Comparison
NZ_CP129760.1 See Comparison
NZ_CP129722.1 See Comparison
NZ_CP129778.1 See Comparison
NZ_CP131908.1 See Comparison
NZ_CP131702.1 See Comparison
NZ_CP131681.1 See Comparison
NZ_MF150118.1 See Comparison
NZ_CP142989.1 See Comparison
CP052444.1 See Comparison
NZ_CP040034.1 See Comparison
NZ_CP040029.1 See Comparison
NZ_CP065454.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore