Plasmid NZ_CP088231.1

Sequence

Nucleotide Information

Accession NZ_CP088231.1
Description Enterobacter kobei strain Ek72 plasmid pEk72-2, complete sequence
Source refseq
Topology circular
Length 2495 bp
GC Content 0.52 %
Created at NCBI May 27, 2022



Assembly

Genome Data Information

Accession GCF_023547315.1
Assembly Coverage 110


Biosample

Curated Collection Information
Accession 22612881

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 22.38N;114.05E
Original Query Type coordinates
Coordinates (Lat/Lon) 22.38/114.05
Address No. 22, Tai Lam Town Gas Pipeline, Tsing Fai Tong, Sham Tseng Sun Tsuen, Tsuen Wan District, New Territories, Hong Kong, China

ECOSYSTEM
Original Query Homo sapiens,shunt fluid
Classification host_associated,nervous_system
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_LR890368.1 See Comparison
NZ_CP059716.1 See Comparison
NZ_CP117758.1 See Comparison
NZ_CP095278.1 See Comparison
NZ_AP025817.1 See Comparison
NZ_AP025786.1 See Comparison
NZ_AP025809.1 See Comparison
NZ_AP025820.1 See Comparison
NZ_AP025803.1 See Comparison
OW969719.1 See Comparison
OW969673.1 See Comparison
OW968300.1 See Comparison
OW849487.1 See Comparison
OW849288.1 See Comparison
OW849255.1 See Comparison
OW849393.1 See Comparison
OW849282.1 See Comparison
NZ_CP041736.1 See Comparison
NZ_AP025338.1 See Comparison
NZ_CP043385.1 See Comparison
NZ_CP114999.1 See Comparison
NZ_CP114996.1 See Comparison
NZ_CP059716.1 See Comparison
NZ_CP126806.1 See Comparison
CP052509.1 See Comparison
CP052502.1 See Comparison
NZ_AP028046.1 See Comparison
NZ_AP028054.1 See Comparison
NZ_LR890368.1 See Comparison
OW849393.1 See Comparison
NZ_CP117758.1 See Comparison
NZ_AP025817.1 See Comparison
NZ_AP025786.1 See Comparison
NZ_AP025809.1 See Comparison
NZ_AP025820.1 See Comparison
NZ_AP025803.1 See Comparison
OW849487.1 See Comparison
NZ_CP095278.1 See Comparison
OW969719.1 See Comparison
OW969673.1 See Comparison
OW968300.1 See Comparison
NZ_CP043385.1 See Comparison
OW849255.1 See Comparison
NZ_AP025338.1 See Comparison
OW849288.1 See Comparison
OW849282.1 See Comparison
NZ_CP041736.1 See Comparison
NZ_CP126806.1 See Comparison
NZ_CP114999.1 See Comparison
NZ_CP114996.1 See Comparison
NZ_AP028046.1 See Comparison
NZ_AP028054.1 See Comparison
CP052509.1 See Comparison
CP052502.1 See Comparison
OW849288.1 See Comparison
NZ_LR890368.1 See Comparison
NZ_CP059716.1 See Comparison
NZ_CP095278.1 See Comparison
NZ_AP025817.1 See Comparison
NZ_AP025786.1 See Comparison
NZ_AP025809.1 See Comparison
NZ_AP025820.1 See Comparison
NZ_AP025803.1 See Comparison
OW968300.1 See Comparison
OW849255.1 See Comparison
NZ_CP117758.1 See Comparison
OW969719.1 See Comparison
OW969673.1 See Comparison
OW849487.1 See Comparison
OW849393.1 See Comparison
OW849282.1 See Comparison
NZ_AP028046.1 See Comparison
NZ_AP025338.1 See Comparison
NZ_CP043385.1 See Comparison
NZ_CP114999.1 See Comparison
NZ_CP114996.1 See Comparison
NZ_CP126806.1 See Comparison
NZ_CP041736.1 See Comparison
NZ_AP028054.1 See Comparison
NZ_LR890368.1 See Comparison
CP052509.1 See Comparison
CP052502.1 See Comparison
NZ_CP059716.1 See Comparison
NZ_AP025817.1 See Comparison
NZ_CP117758.1 See Comparison
NZ_CP095278.1 See Comparison
NZ_AP025820.1 See Comparison
NZ_AP025803.1 See Comparison
NZ_AP025786.1 See Comparison
NZ_AP025809.1 See Comparison
NZ_CP088231.1 See Comparison
OW969719.1 See Comparison
OW969673.1 See Comparison
NZ_AP025338.1 See Comparison
OW968300.1 See Comparison
OW849393.1 See Comparison
OW849255.1 See Comparison
OW849487.1 See Comparison
OW849288.1 See Comparison
OW849282.1 See Comparison
NZ_CP043385.1 See Comparison
NZ_CP041736.1 See Comparison
NZ_CP126806.1 See Comparison
NZ_CP114999.1 See Comparison
NZ_CP114996.1 See Comparison
OW969719.1 See Comparison
CP052509.1 See Comparison
CP052502.1 See Comparison
NZ_LR890368.1 See Comparison
NZ_CP059716.1 See Comparison
NZ_CP095278.1 See Comparison
NZ_AP025809.1 See Comparison
NZ_AP025820.1 See Comparison
NZ_AP025803.1 See Comparison
NZ_AP028046.1 See Comparison
NZ_AP028054.1 See Comparison
NZ_CP117758.1 See Comparison
NZ_AP025817.1 See Comparison
NZ_AP025786.1 See Comparison
OW969673.1 See Comparison
OW968300.1 See Comparison
NZ_CP059716.1 See Comparison
NZ_CP043385.1 See Comparison
NZ_CP114999.1 See Comparison
NZ_CP114996.1 See Comparison
CP052509.1 See Comparison
CP052502.1 See Comparison
OW849487.1 See Comparison
OW849393.1 See Comparison
OW849288.1 See Comparison
OW849282.1 See Comparison
OW849255.1 See Comparison
NZ_AP025338.1 See Comparison
NZ_CP041736.1 See Comparison
NZ_CP126806.1 See Comparison
NZ_AP028046.1 See Comparison
NZ_AP028054.1 See Comparison
NZ_LR890368.1 See Comparison
NZ_CP117758.1 See Comparison
NZ_AP025820.1 See Comparison
NZ_CP095278.1 See Comparison
NZ_AP025803.1 See Comparison
OW969673.1 See Comparison
NZ_AP025817.1 See Comparison
NZ_AP025786.1 See Comparison
NZ_AP025809.1 See Comparison
NZ_CP041736.1 See Comparison
OW849393.1 See Comparison
NZ_AP025338.1 See Comparison
OW969719.1 See Comparison
OW968300.1 See Comparison
OW849487.1 See Comparison
OW849288.1 See Comparison
OW849282.1 See Comparison
OW849255.1 See Comparison
NZ_CP114999.1 See Comparison
NZ_CP043385.1 See Comparison
NZ_CP114996.1 See Comparison
CP052502.1 See Comparison
NZ_AP028046.1 See Comparison
NZ_AP028054.1 See Comparison
NZ_CP126806.1 See Comparison
CP052509.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore