Plasmid NZ_CP084395.1

Sequence

Nucleotide Information

Accession NZ_CP084395.1
Description Klebsiella pneumoniae subsp. pneumoniae strain MRSN752019 plasmid pSI646A-ARMA-Vir-NDM, complete sequence
Source refseq
Topology circular
Length 374716 bp
GC Content 0.47 %
Created at NCBI Oct. 4, 2021



Assembly

Genome Data Information

Accession GCF_018283505.2
Assembly Coverage 600


Biosample

Curated Collection Information
Accession 18913844

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Italy,Siena
Original Query Type name
Coordinates (Lat/Lon) 43.17/11.47
Address Italy,Siena

ECOSYSTEM
Original Query Homo sapiens,Surveillance
Classification anthropogenic,construction,hospital,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_ON081621.1 See Comparison
NZ_CP070891.1 See Comparison
NZ_CP071028.1 See Comparison
NZ_MW911668.1 See Comparison
NZ_MW911671.1 See Comparison
NZ_MW911666.1 See Comparison
NZ_CP077784.1 See Comparison
NZ_CP072810.1 See Comparison
NZ_CP070891.1 See Comparison
NZ_CP040726.1 See Comparison
NZ_CP137400.1 See Comparison
NZ_CP050380.1 See Comparison
NZ_MT648512.1 See Comparison
NZ_ON081621.1 See Comparison
NZ_CP071028.1 See Comparison
NZ_CP077784.1 See Comparison
NZ_MW911668.1 See Comparison
NZ_MW911671.1 See Comparison
NZ_MW911666.1 See Comparison
NZ_CP050380.1 See Comparison
NZ_MT648512.1 See Comparison
NZ_CP072810.1 See Comparison
NZ_CP137400.1 See Comparison
NZ_CP040726.1 See Comparison
NZ_MT648512.1 See Comparison
NZ_CP070891.1 See Comparison
NZ_CP071028.1 See Comparison
NZ_CP077784.1 See Comparison
NZ_ON081621.1 See Comparison
NZ_MW911668.1 See Comparison
NZ_MW911671.1 See Comparison
NZ_MW911666.1 See Comparison
NZ_CP072810.1 See Comparison
NZ_MW911668.1 See Comparison
NZ_CP040726.1 See Comparison
NZ_ON081621.1 See Comparison
NZ_CP070891.1 See Comparison
NZ_CP071028.1 See Comparison
NZ_CP137400.1 See Comparison
NZ_CP050380.1 See Comparison
NZ_MW911671.1 See Comparison
NZ_MW911666.1 See Comparison
NZ_CP040726.1 See Comparison
NZ_MT648512.1 See Comparison
NZ_CP072810.1 See Comparison
NZ_CP077784.1 See Comparison
NZ_CP050380.1 See Comparison
NZ_CP137400.1 See Comparison
NZ_ON081621.1 See Comparison
NZ_CP084395.1 See Comparison
NZ_CP070891.1 See Comparison
NZ_CP071028.1 See Comparison
NZ_CP072810.1 See Comparison
NZ_MW911668.1 See Comparison
NZ_MW911671.1 See Comparison
NZ_MW911666.1 See Comparison
NZ_CP077784.1 See Comparison
NZ_MT648512.1 See Comparison
NZ_CP137400.1 See Comparison
NZ_CP040726.1 See Comparison
NZ_ON081621.1 See Comparison
NZ_CP050380.1 See Comparison
NZ_CP072810.1 See Comparison
NZ_MW911668.1 See Comparison
NZ_MW911671.1 See Comparison
NZ_MW911666.1 See Comparison
NZ_CP070891.1 See Comparison
NZ_CP071028.1 See Comparison
NZ_CP077784.1 See Comparison
NZ_MT648512.1 See Comparison
NZ_CP040726.1 See Comparison
NZ_CP137400.1 See Comparison
NZ_CP050380.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Biosynthetic Gene Clusters

based on ANTISMASH

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore