PLSDB
v. 2024_05_31_v2
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Antimicrobial Resistance Genes
Typing
Plasmid NZ_CP080130.1
Sequence
Nucleotide Information
Accession
NZ_CP080130.1
Description
Escherichia coli strain PK8568 plasmid pPK8568-MCR1, complete sequence
Source
refseq
Topology
circular
Length
60659 bp
GC Content
0.42 %
Created at NCBI
Aug. 2, 2021
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Escherichia coli (562)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Escherichia (561)
Species
Escherichia_coli (562)
Strain
Assembly
Genome Data Information
Accession
GCF_019428645.1
Assembly Coverage
100
Biosample
Curated Collection Information
Accession
20348874
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
31.41N;73.11E
Original Query Type
coordinates
Coordinates (Lat/Lon)
31.41/73.11
Address
Faisalabad City Tehsil, Faisalabad District, Punjab, 38000, Pakistan
ECOSYSTEM
Original Query
chicken
Classification
host_associated
Host-associated Taxon
Gallus gallus (
9031
)
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
Collapse all
Expand all
Plasmids from same Biosample
NZ_CP080132.1
NZ_CP080131.1
NZ_CP080129.1
NZ_CP080128.1
NZ_CP080127.1
Similar Plasmids
based on Mash distance
NZ_MW373507.1
See Comparison
NZ_CP080148.1
See Comparison
NZ_CP080136.1
See Comparison
NZ_CP067343.1
See Comparison
NZ_CP075067.1
See Comparison
NZ_CP021176.1
See Comparison
NZ_CP020548.1
See Comparison
NZ_CP033254.2
See Comparison
NZ_CP029184.1
See Comparison
NZ_MN232203.1
See Comparison
NZ_AP027699.1
See Comparison
NZ_AP027682.1
See Comparison
NZ_AP027711.1
See Comparison
NZ_AP027715.1
See Comparison
NZ_AP027901.1
See Comparison
AP027529.1
See Comparison
NZ_CP126508.1
See Comparison
NZ_AP027675.1
See Comparison
NZ_MN232198.1
See Comparison
NZ_MN232184.1
See Comparison
NZ_MN232186.1
See Comparison
NZ_MN232185.1
See Comparison
NZ_MN232183.1
See Comparison
NZ_MN232201.1
See Comparison
NZ_MN232196.1
See Comparison
NZ_MN232182.1
See Comparison
NZ_MH522412.1
See Comparison
NZ_MN232213.1
See Comparison
NZ_MN232208.1
See Comparison
NZ_MN232204.1
See Comparison
NZ_MN232205.1
See Comparison
NZ_MN232211.1
See Comparison
NZ_MN232210.1
See Comparison
NZ_KY657478.1
See Comparison
NZ_KY657476.1
See Comparison
NZ_CP058303.1
See Comparison
NZ_CP055260.1
See Comparison
NZ_MF175189.1
See Comparison
NZ_MG808035.1
See Comparison
NZ_MF175188.1
See Comparison
NZ_MG825374.1
See Comparison
NZ_KY120365.1
See Comparison
NZ_KY795978.1
See Comparison
NZ_MK574669.1
See Comparison
NZ_CP016187.1
See Comparison
NZ_LC511662.1
See Comparison
NZ_KY012274.1
See Comparison
NZ_CP016186.1
See Comparison
NZ_CP016185.1
See Comparison
NZ_CP047579.1
See Comparison
NZ_CP034109.1
See Comparison
NZ_CP070924.1
See Comparison
NZ_CP065423.1
See Comparison
NZ_CP061128.1
See Comparison
NZ_CP062982.1
See Comparison
NZ_MN746292.1
See Comparison
NZ_MK574667.1
See Comparison
NZ_OM839890.1
See Comparison
NZ_MZ277864.1
See Comparison
NZ_MW373507.1
See Comparison
NZ_CP104081.1
See Comparison
NZ_CP067343.1
See Comparison
NZ_CP075067.1
See Comparison
NZ_CP080148.1
See Comparison
NZ_CP080136.1
See Comparison
NZ_CP029184.1
See Comparison
NZ_CP020548.1
See Comparison
NZ_CP021176.1
See Comparison
NZ_CP033254.2
See Comparison
NZ_CP126508.1
See Comparison
AP027529.1
See Comparison
NZ_MN232213.1
See Comparison
NZ_MN232186.1
See Comparison
NZ_MN232185.1
See Comparison
NZ_MN232183.1
See Comparison
NZ_MN232201.1
See Comparison
NZ_MN232196.1
See Comparison
NZ_MN232182.1
See Comparison
NZ_AP027699.1
See Comparison
NZ_AP027682.1
See Comparison
NZ_AP027711.1
See Comparison
NZ_AP027715.1
See Comparison
NZ_AP027901.1
See Comparison
NZ_AP027675.1
See Comparison
NZ_MN232208.1
See Comparison
NZ_MN232204.1
See Comparison
NZ_MN232205.1
See Comparison
NZ_MN232211.1
See Comparison
NZ_MN232210.1
See Comparison
NZ_KY657478.1
See Comparison
NZ_KY657476.1
See Comparison
NZ_MN232203.1
See Comparison
NZ_MN232198.1
See Comparison
NZ_MN232184.1
See Comparison
NZ_CP058303.1
See Comparison
NZ_CP055260.1
See Comparison
NZ_KY012274.1
See Comparison
NZ_MH522412.1
See Comparison
NZ_MF175189.1
See Comparison
NZ_MG825374.1
See Comparison
NZ_KY795978.1
See Comparison
NZ_MG808035.1
See Comparison
NZ_MF175188.1
See Comparison
NZ_KY120365.1
See Comparison
NZ_OM839890.1
See Comparison
NZ_CP016187.1
See Comparison
NZ_CP016186.1
See Comparison
NZ_CP016185.1
See Comparison
NZ_CP065423.1
See Comparison
NZ_CP061128.1
See Comparison
NZ_MK574669.1
See Comparison
NZ_MK574667.1
See Comparison
NZ_CP047579.1
See Comparison
NZ_CP034109.1
See Comparison
NZ_CP070924.1
See Comparison
NZ_CP062982.1
See Comparison
NZ_MN746292.1
See Comparison
NZ_LC511662.1
See Comparison
NZ_CP104081.1
See Comparison
NZ_MZ277864.1
See Comparison
NZ_CP058303.1
See Comparison
NZ_MW373507.1
See Comparison
NZ_CP080148.1
See Comparison
NZ_CP080136.1
See Comparison
NZ_CP075067.1
See Comparison
NZ_CP020548.1
See Comparison
AP027529.1
See Comparison
NZ_CP126508.1
See Comparison
NZ_AP027699.1
See Comparison
NZ_AP027682.1
See Comparison
NZ_AP027711.1
See Comparison
NZ_AP027715.1
See Comparison
NZ_AP027901.1
See Comparison
NZ_AP027675.1
See Comparison
NZ_MN232213.1
See Comparison
NZ_MN232208.1
See Comparison
NZ_MN232204.1
See Comparison
NZ_MN232205.1
See Comparison
NZ_MN232211.1
See Comparison
NZ_MN232210.1
See Comparison
NZ_KY657478.1
See Comparison
NZ_KY657476.1
See Comparison
NZ_MN232203.1
See Comparison
NZ_MN232198.1
See Comparison
NZ_MN232184.1
See Comparison
NZ_MN232186.1
See Comparison
NZ_MN232185.1
See Comparison
NZ_CP067343.1
See Comparison
NZ_CP021176.1
See Comparison
NZ_CP033254.2
See Comparison
NZ_CP029184.1
See Comparison
NZ_MN232183.1
See Comparison
NZ_MN232201.1
See Comparison
NZ_MN232196.1
See Comparison
NZ_MN232182.1
See Comparison
NZ_MF175189.1
See Comparison
NZ_MG808035.1
See Comparison
NZ_MF175188.1
See Comparison
NZ_CP055260.1
See Comparison
NZ_MH522412.1
See Comparison
NZ_MG825374.1
See Comparison
NZ_KY120365.1
See Comparison
NZ_KY795978.1
See Comparison
NZ_CP062982.1
See Comparison
NZ_CP016187.1
See Comparison
NZ_CP016186.1
See Comparison
NZ_CP016185.1
See Comparison
NZ_CP034109.1
See Comparison
NZ_KY012274.1
See Comparison
NZ_CP047579.1
See Comparison
NZ_CP070924.1
See Comparison
NZ_CP065423.1
See Comparison
NZ_CP061128.1
See Comparison
NZ_MN746292.1
See Comparison
NZ_OM839890.1
See Comparison
NZ_LC511662.1
See Comparison
NZ_MK574669.1
See Comparison
NZ_MK574667.1
See Comparison
NZ_MZ277864.1
See Comparison
NZ_CP075067.1
See Comparison
NZ_CP104081.1
See Comparison
NZ_MW373507.1
See Comparison
NZ_CP080148.1
See Comparison
NZ_CP080136.1
See Comparison
NZ_CP067343.1
See Comparison
NZ_CP029184.1
See Comparison
NZ_CP033254.2
See Comparison
NZ_CP021176.1
See Comparison
NZ_CP020548.1
See Comparison
AP027529.1
See Comparison
NZ_MN232213.1
See Comparison
NZ_AP027699.1
See Comparison
NZ_AP027682.1
See Comparison
NZ_AP027711.1
See Comparison
NZ_AP027715.1
See Comparison
NZ_AP027901.1
See Comparison
NZ_AP027675.1
See Comparison
NZ_CP126508.1
See Comparison
NZ_MN232208.1
See Comparison
NZ_MN232204.1
See Comparison
NZ_MN232205.1
See Comparison
NZ_MN232211.1
See Comparison
NZ_MN232210.1
See Comparison
NZ_KY657478.1
See Comparison
NZ_KY657476.1
See Comparison
NZ_MN232203.1
See Comparison
NZ_MN232198.1
See Comparison
NZ_MN232184.1
See Comparison
NZ_MN232186.1
See Comparison
NZ_MN232185.1
See Comparison
NZ_MN232183.1
See Comparison
NZ_MN232201.1
See Comparison
NZ_MN232196.1
See Comparison
NZ_MN232182.1
See Comparison
NZ_CP058303.1
See Comparison
NZ_MF175189.1
See Comparison
NZ_CP055260.1
See Comparison
NZ_MH522412.1
See Comparison
NZ_MG825374.1
See Comparison
NZ_MG808035.1
See Comparison
NZ_MF175188.1
See Comparison
NZ_CP065423.1
See Comparison
NZ_KY120365.1
See Comparison
NZ_CP047579.1
See Comparison
NZ_KY795978.1
See Comparison
NZ_KY012274.1
See Comparison
NZ_CP016187.1
See Comparison
NZ_CP016186.1
See Comparison
NZ_CP016185.1
See Comparison
NZ_CP034109.1
See Comparison
NZ_CP070924.1
See Comparison
NZ_CP061128.1
See Comparison
NZ_LC511662.1
See Comparison
NZ_CP062982.1
See Comparison
NZ_MK574669.1
See Comparison
NZ_MK574667.1
See Comparison
NZ_MN746292.1
See Comparison
NZ_MZ277864.1
See Comparison
NZ_OM839890.1
See Comparison
NZ_MW373507.1
See Comparison
NZ_CP104081.1
See Comparison
NZ_CP080148.1
See Comparison
NZ_CP080130.1
See Comparison
NZ_CP080136.1
See Comparison
NZ_CP075067.1
See Comparison
NZ_CP067343.1
See Comparison
NZ_CP033254.2
See Comparison
NZ_CP020548.1
See Comparison
NZ_CP021176.1
See Comparison
AP027529.1
See Comparison
NZ_CP029184.1
See Comparison
NZ_AP027711.1
See Comparison
NZ_CP126508.1
See Comparison
NZ_AP027715.1
See Comparison
NZ_AP027901.1
See Comparison
NZ_AP027675.1
See Comparison
NZ_MN232213.1
See Comparison
NZ_AP027699.1
See Comparison
NZ_AP027682.1
See Comparison
NZ_MN232204.1
See Comparison
NZ_MN232205.1
See Comparison
NZ_MN232211.1
See Comparison
NZ_MN232210.1
See Comparison
NZ_KY657478.1
See Comparison
NZ_KY657476.1
See Comparison
NZ_MN232203.1
See Comparison
NZ_MN232198.1
See Comparison
NZ_MN232184.1
See Comparison
NZ_MN232186.1
See Comparison
NZ_MN232185.1
See Comparison
NZ_MN232208.1
See Comparison
NZ_MN232183.1
See Comparison
NZ_CP058303.1
See Comparison
NZ_MN232201.1
See Comparison
NZ_MN232196.1
See Comparison
NZ_MN232182.1
See Comparison
NZ_MH522412.1
See Comparison
NZ_CP055260.1
See Comparison
NZ_KY120365.1
See Comparison
NZ_KY795978.1
See Comparison
NZ_KY012274.1
See Comparison
NZ_MF175189.1
See Comparison
NZ_MG825374.1
See Comparison
NZ_MG808035.1
See Comparison
NZ_MF175188.1
See Comparison
NZ_CP047579.1
See Comparison
NZ_CP016187.1
See Comparison
NZ_CP016186.1
See Comparison
NZ_CP016185.1
See Comparison
NZ_MZ277864.1
See Comparison
NZ_CP062982.1
See Comparison
NZ_MN746292.1
See Comparison
NZ_OM839890.1
See Comparison
NZ_CP034109.1
See Comparison
NZ_CP070924.1
See Comparison
NZ_CP065423.1
See Comparison
NZ_CP061128.1
See Comparison
NZ_MK574669.1
See Comparison
NZ_MK574667.1
See Comparison
NZ_LC511662.1
See Comparison
NZ_CP080148.1
See Comparison
NZ_CP104081.1
See Comparison
NZ_MW373507.1
See Comparison
NZ_CP080136.1
See Comparison
NZ_CP067343.1
See Comparison
NZ_CP021176.1
See Comparison
NZ_CP075067.1
See Comparison
NZ_CP033254.2
See Comparison
NZ_CP020548.1
See Comparison
AP027529.1
See Comparison
NZ_CP029184.1
See Comparison
NZ_AP027715.1
See Comparison
NZ_CP126508.1
See Comparison
NZ_AP027901.1
See Comparison
NZ_AP027675.1
See Comparison
NZ_MN232210.1
See Comparison
NZ_AP027699.1
See Comparison
NZ_AP027682.1
See Comparison
NZ_AP027711.1
See Comparison
NZ_KY657478.1
See Comparison
NZ_KY657476.1
See Comparison
NZ_MN232203.1
See Comparison
NZ_MN232198.1
See Comparison
NZ_MN232184.1
See Comparison
NZ_MN232213.1
See Comparison
NZ_MN232186.1
See Comparison
NZ_MN232208.1
See Comparison
NZ_MN232204.1
See Comparison
NZ_MN232185.1
See Comparison
NZ_MN232183.1
See Comparison
NZ_MN232205.1
See Comparison
NZ_MN232211.1
See Comparison
NZ_MN232201.1
See Comparison
NZ_MN232196.1
See Comparison
NZ_MN232182.1
See Comparison
NZ_KY795978.1
See Comparison
NZ_CP058303.1
See Comparison
NZ_CP055260.1
See Comparison
NZ_MF175189.1
See Comparison
NZ_MG825374.1
See Comparison
NZ_MG808035.1
See Comparison
NZ_MF175188.1
See Comparison
NZ_MH522412.1
See Comparison
NZ_KY012274.1
See Comparison
NZ_KY120365.1
See Comparison
NZ_CP047579.1
See Comparison
NZ_CP016187.1
See Comparison
NZ_CP016186.1
See Comparison
NZ_CP016185.1
See Comparison
NZ_CP034109.1
See Comparison
NZ_CP070924.1
See Comparison
NZ_CP065423.1
See Comparison
NZ_CP061128.1
See Comparison
NZ_MN746292.1
See Comparison
NZ_CP062982.1
See Comparison
NZ_MK574669.1
See Comparison
NZ_MK574667.1
See Comparison
NZ_MZ277864.1
See Comparison
NZ_LC511662.1
See Comparison
NZ_OM839890.1
See Comparison
NZ_CP104081.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
NUCCORE ACC
Source
Element Name
Display
Sequence
Favorite
Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Antimicrobial Resistance
based on NCBIAMRFinder and CARD
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
NUCCORE ACC
Analysis Software Name
Reference Database Version
Gene Symbol
Gene Name
Drug Class
Antimicrobial Agent
Gene Start
Gene Stop
Gene Length
Strand Orientation
Sequence Identity (%)
Coverage (%)
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore