Plasmid NZ_CP073794.1

Sequence

Nucleotide Information

Accession NZ_CP073794.1
Description Klebsiella pneumoniae isolate KP_NORM_BLD_2010_71621 plasmid unnamed_3, complete sequence
Source refseq
Topology circular
Length 8801 bp
GC Content 0.56 %
Created at NCBI Aug. 31, 2021



Assembly

Genome Data Information

Accession GCF_019798185.1
Assembly Coverage 58


Biosample

Curated Collection Information
Accession 18859974

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Norway
Original Query Type name
Coordinates (Lat/Lon) 64.57/11.53
Address Norway

ECOSYSTEM
Original Query Homo sapiens,blood
Classification blood,circulatory_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query diseased
DOID/SYMP
  • Disease (DOID:4 )
    • A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP122392.1 See Comparison
NZ_CP097085.1 See Comparison
NZ_CP097078.1 See Comparison
NZ_CP111011.1 See Comparison
NZ_CP111002.1 See Comparison
NZ_CP084244.1 See Comparison
NZ_CP111011.1 See Comparison
NZ_CP092281.1 See Comparison
NZ_CP122392.1 See Comparison
NZ_CP075555.1 See Comparison
NZ_CP097085.1 See Comparison
NZ_CP097078.1 See Comparison
NZ_CP111002.1 See Comparison
NZ_CP084244.1 See Comparison
NZ_CP092281.1 See Comparison
NZ_CP075555.1 See Comparison
NZ_CP075555.1 See Comparison
NZ_CP097085.1 See Comparison
NZ_CP097078.1 See Comparison
NZ_CP122392.1 See Comparison
NZ_CP111011.1 See Comparison
NZ_CP111002.1 See Comparison
NZ_CP084244.1 See Comparison
NZ_CP092281.1 See Comparison
NZ_CP075555.1 See Comparison
NZ_CP097085.1 See Comparison
NZ_CP097078.1 See Comparison
NZ_CP084244.1 See Comparison
NZ_CP122392.1 See Comparison
NZ_CP111011.1 See Comparison
NZ_CP111002.1 See Comparison
NZ_CP075555.1 See Comparison
NZ_CP097085.1 See Comparison
NZ_CP097078.1 See Comparison
NZ_CP092281.1 See Comparison
NZ_CP122392.1 See Comparison
NZ_CP111011.1 See Comparison
NZ_CP111002.1 See Comparison
NZ_CP084244.1 See Comparison
NZ_CP092281.1 See Comparison
NZ_CP097085.1 See Comparison
NZ_CP122392.1 See Comparison
NZ_CP097078.1 See Comparison
NZ_CP097085.1 See Comparison
NZ_CP111011.1 See Comparison
NZ_CP111002.1 See Comparison
NZ_CP084244.1 See Comparison
NZ_CP073794.1 See Comparison
NZ_CP075555.1 See Comparison
NZ_CP092281.1 See Comparison
NZ_CP122392.1 See Comparison
NZ_CP097078.1 See Comparison
NZ_CP075555.1 See Comparison
NZ_CP084244.1 See Comparison
NZ_CP111011.1 See Comparison
NZ_CP111002.1 See Comparison
NZ_CP092281.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Biosynthetic Gene Clusters

based on ANTISMASH

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2