Plasmid NZ_CP063882.1

Sequence

Nucleotide Information

Accession NZ_CP063882.1
Description Klebsiella pneumoniae strain S90-2 plasmid pS90-2.1, complete sequence
Source refseq
Topology circular
Length 110388 bp
GC Content 0.49 %
Created at NCBI Jan. 18, 2021



Assembly

Genome Data Information

Accession GCF_015278095.1
Assembly Coverage 325.61


Biosample

Curated Collection Information
Accession 16539551

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 23.15N;113.27E
Original Query Type coordinates
Coordinates (Lat/Lon) 23.15/113.27
Address 广州麓湖高尔夫球乡村俱乐部, 广园中路辅路, Jingtaikeng, Jingtai, Baiyun District, Guangzhou City, Guangdong Province, 510091, China

ECOSYSTEM
Original Query wild chukar,feces
Classification fecal,gastrointestinal_system,host_associated
Host-associated Taxon
  • Alectoris chukar (9078)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample




Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore